RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 SIK2Q9H0K1 926 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 DHX35Q9H5Z1 703 aaKnown RBP7.1□□□□□ -1.27
SCAF4-204ENST00000467731 TDP1Q9NUW8 608 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 CD207Q9UJ71 328 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 ZMYM5Q9UJ78 669 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 SNX12Q9UMY4 172 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 ARHGAP26Q9UNA1 814 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 MYO10Q9HD67 2058 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 LRRD1A4D1F6 860 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 SOBPA7XYQ1 873 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 FAM72CH0Y354 149 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 TPD52L2O43399 206 aaKnown RBP7.1□□□□□ -1.27
SCAF4-204ENST00000467731 ZRANB2O95218 330 aaKnown RBP eCLIP7.1□□□□□ -1.271e-6■■■■□ 23.3
SCAF4-204ENST00000467731 KRT1P04264 644 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 PYGMP11217 842 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 CORO1AP31146 461 aaKnown RBP7.1□□□□□ -1.27
SCAF4-204ENST00000467731 CDH6P55285 790 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 ZNF211Q13398 564 aaPredicted RBP7.1□□□□□ -1.27
SCAF4-204ENST00000467731 DPYSL2Q16555 572 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 ODF2Q5BJF6 829 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 FAM72AQ5TYM5 149 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 PIK3R6Q5UE93 754 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 FAM72DQ6L9T8 149 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 ANKS1BQ7Z6G8 1248 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 FAM72BQ86X60 149 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 UNC45BQ8IWX7 931 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 KCTD6Q8NC69 237 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 ST13P5Q8NFI4 369 aaPredicted RBP7.1□□□□□ -1.27
SCAF4-204ENST00000467731 CCDC26Q8TAB7 109 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 SH3RF2Q8TEC5 729 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 RNF25Q96BH1 459 aaPredicted RBP7.1□□□□□ -1.27
SCAF4-204ENST00000467731 MIEF2Q96C03 454 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 BTN2A3PQ96KV6 586 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 KCTD15Q96SI1 283 aaPredicted RBP7.1□□□□□ -1.27
SCAF4-204ENST00000467731 CARD9Q9H257 536 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 CHCHD3Q9NX63 227 aaKnown RBP7.1□□□□□ -1.27
SCAF4-204ENST00000467731 DDX56Q9NY93 547 aaKnown RBP7.1□□□□□ -1.27
SCAF4-204ENST00000467731 GDE1Q9NZC3 331 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 OR12D3Q9UGF7 316 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 USP15Q9Y4E8 981 aaPredicted RBP7.1□□□□□ -1.27
SCAF4-204ENST00000467731 SNX10Q9Y5X0 201 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 HS3ST4Q9Y661 456 aa7.1□□□□□ -1.27
SCAF4-204ENST00000467731 LEFTY2O00292 366 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 CREB3O43889 395 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 GREM1O60565 184 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 KDELR1P24390 212 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 L1CAMP32004 1257 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 MTHFRP42898 656 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 AMPD2Q01433 879 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 GPS2Q13227 327 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 DPYSL3Q14195 570 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 MS4A13Q5J8X5 152 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 PSTKQ8IV42 348 aaKnown RBP7.09□□□□□ -1.27
SCAF4-204ENST00000467731 CCDC50Q8IVM0 306 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 ATP6V0D2Q8N8Y2 350 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 EXD1Q8NHP7 514 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 COG1Q8WTW3 980 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 SUSD6Q92537 303 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 ASB16Q96NS5 453 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 HAPLN3Q96S86 360 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 MYADMQ96S97 322 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 SH3GL3Q99963 347 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 CALN1Q9BXU9 219 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 PCDH18Q9HCL0 1135 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 CFAP97Q9P2B7 532 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 SLC12A6Q9UHW9 1150 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 AGO1Q9UL18 857 aaKnown RBP7.09□□□□□ -1.27
SCAF4-204ENST00000467731 SAR1BQ9Y6B6 198 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 C3orf70A6NLC5 250 aaPredicted RBP7.09□□□□□ -1.27
SCAF4-204ENST00000467731 ZNF185O15231 689 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 GOT1P17174 413 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 SP100P23497 879 aaPredicted RBP7.09□□□□□ -1.27
SCAF4-204ENST00000467731 GBP2P32456 591 aaPredicted RBP7.09□□□□□ -1.27
SCAF4-204ENST00000467731 ARSEP51690 589 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 MMRN1Q13201 1228 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 KRT81Q14533 505 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 FAM133BQ5BKY9 247 aaKnown RBP7.09□□□□□ -1.27
SCAF4-204ENST00000467731 FAM78AQ5JUQ0 283 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 MFSD4BQ5TF39 518 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 MFSD7Q6UXD7 560 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 HLA-CQ95604 372 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 RBM41Q96IZ5 413 aaKnown RBP7.09□□□□□ -1.27
SCAF4-204ENST00000467731 NECTIN4Q96NY8 510 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 CDH7Q9ULB5 785 aa7.09□□□□□ -1.27
SCAF4-204ENST00000467731 GOLGA6L7A0A1B0GV03 622 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 GRXCR2A6NFK2 248 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 ACSL4O60488 711 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 LRIG2O94898 1065 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 ECEL1O95672 775 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 TCP1P17987 556 aaKnown RBP7.08□□□□□ -1.28
SCAF4-204ENST00000467731 IL4RP24394 825 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 VIPR2P41587 438 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 SLC11A2P49281 568 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 MLLT6P55198 1093 aaPredicted RBP7.08□□□□□ -1.28
SCAF4-204ENST00000467731 SEMA3BQ13214 749 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 PDK2Q15119 407 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 ZNF77Q15935 545 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 TFDP3Q5H9I0 405 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 SEL1L2Q5TEA6 688 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 RAP1GAP2Q684P5 730 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms