RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 GLE1Q53GS7 698 aaKnown RBP4.27□□□□□ -1.73
VPS50-209ENST00000467326 FAM83BQ5T0W9 1011 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 KYAT3Q6YP21 454 aaKnown RBP4.27□□□□□ -1.73
VPS50-209ENST00000467326 RBM44Q6ZP01 1051 aaKnown RBP4.27□□□□□ -1.73
VPS50-209ENST00000467326 ASB12Q8WXK4 309 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 NPIPB3Q92617 1050 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 HMCESQ96FZ2 354 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 FAR2Q96K12 515 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 SCNM1Q9BWG6 230 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 TRIM2Q9C040 744 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 EPS8L2Q9H6S3 715 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 AGO4Q9HCK5 861 aaKnown RBP4.27□□□□□ -1.73
VPS50-209ENST00000467326 PTPRHQ9HD43 1115 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 ARFGAP3Q9NP61 516 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 KCNK9Q9NPC2 374 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 TMEM184CQ9NVA4 438 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 NOL7Q9UMY1 257 aaKnown RBP4.27□□□□□ -1.73
VPS50-209ENST00000467326 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.26□□□□□ -1.73
VPS50-209ENST00000467326 PIP5K1BO14986 540 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 TLR2O60603 784 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 CNOT3O75175 753 aaKnown RBP4.26□□□□□ -1.73
VPS50-209ENST00000467326 TAF5LO75529 589 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 IGKV2-30P06310 120 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 NPPBP16860 134 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 PPM1AP35813 382 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 STAT6P42226 847 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 TECP42680 631 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 CPA2P48052 419 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 AGTR2P50052 363 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 ALDH18A1P54886 795 aaKnown RBP4.26□□□□□ -1.73
VPS50-209ENST00000467326 SRSF1Q07955 248 aaKnown RBP eCLIP4.26□□□□□ -1.73
VPS50-209ENST00000467326 DMWDQ09019 674 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 BIRC3Q13489 604 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 STIM1Q13586 685 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 ERAP2Q6P179 960 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 C16orf89Q6UX73 402 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 MORC1Q86VD1 984 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 GATAD2AQ86YP4 633 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 RFX6Q8HWS3 928 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 UEVLDQ8IX04 471 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 LAS2Q8IYD9 372 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 SYTL1Q8IYJ3 562 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 NRACQ8N912 160 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 ACRBPQ8NEB7 543 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 PPHLN1Q8NEY8 458 aaKnown RBP4.26□□□□□ -1.73
VPS50-209ENST00000467326 SLC22A17Q8WUG5 538 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 IGFBPL1Q8WX77 278 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 CELF1Q92879 486 aaKnown RBP4.26□□□□□ -1.73
VPS50-209ENST00000467326 TRMT61AQ96FX7 289 aaKnown RBP4.26□□□□□ -1.73
VPS50-209ENST00000467326 P2RY11Q96G91 374 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 ZNF845Q96IR2 970 aaPredicted RBP4.26□□□□□ -1.73
VPS50-209ENST00000467326 TMEM79Q9BSE2 394 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 ELOVL1Q9BW60 279 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 MLXIPLQ9NP71 852 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 LUZP4Q9P127 313 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 CDC23Q9UJX2 597 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 PCDHB7Q9Y5E2 793 aa4.26□□□□□ -1.73
VPS50-209ENST00000467326 DYTNA2CJ06 578 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 ASNA1O43681 348 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 RNASEH2AO75792 299 aaKnown RBP4.25□□□□□ -1.73
VPS50-209ENST00000467326 NTSR2O95665 410 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 HSP90AB1P08238 724 aaKnown RBP4.25□□□□□ -1.73
VPS50-209ENST00000467326 PRF1P14222 555 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 TFEBP19484 476 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 AKT1P31749 480 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 SOX2P48431 317 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 CCT4P50991 539 aaKnown RBP4.25□□□□□ -1.73
VPS50-209ENST00000467326 GEMIN4P57678 1058 aaKnown RBP4.25□□□□□ -1.73
VPS50-209ENST00000467326 LAMB3Q13751 1172 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 PDE1CQ14123 709 aaPredicted RBP4.25□□□□□ -1.73
VPS50-209ENST00000467326 PUM3Q15397 648 aaKnown RBP4.25□□□□□ -1.73
VPS50-209ENST00000467326 MMS22LQ6ZRQ5 1243 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 UBE2Q1Q7Z7E8 422 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 PIP4P1Q86T03 277 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 ZFPM2Q8WW38 1151 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 SKA1Q96BD8 255 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 TMEM41AQ96HV5 264 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 PRPF18Q99633 342 aaKnown RBP4.25□□□□□ -1.73
VPS50-209ENST00000467326 PAAF1Q9BRP4 392 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 TTLL2Q9BWV7 592 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 GATA5Q9BWX5 397 aaPredicted RBP4.25□□□□□ -1.73
VPS50-209ENST00000467326 IGSF9Q9P2J2 1179 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 POLG2Q9UHN1 485 aa4.25□□□□□ -1.73
VPS50-209ENST00000467326 MAGED2Q9UNF1 606 aaPredicted RBP4.25□□□□□ -1.73
VPS50-209ENST00000467326 EMSYQ7Z589 1322 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 LY6G6EA0A0G2JKS1 128 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 BICDL2A1A5D9 508 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 AQP12BA6NM10 295 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 F8W810 466 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 RPP40O75818 363 aaKnown RBP4.24□□□□□ -1.73
VPS50-209ENST00000467326 CER1O95813 267 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 ANXA6P08133 673 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 AKR1A1P14550 325 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 HALP42357 657 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 NR4A2P43354 598 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 CCT5P48643 541 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 ZNF84P51523 738 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
VPS50-209ENST00000467326 GRM4Q14833 912 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 HYIQ5T013 277 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms