RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 FNDC3BQ53EP0 1204 aaKnown RBP12.71□□□□□ -0.37
UBR4-211ENST00000467272 FAM133BQ5BKY9 247 aaKnown RBP12.71□□□□□ -0.37
UBR4-211ENST00000467272 MBLAC2Q68D91 279 aa12.71□□□□□ -0.37
UBR4-211ENST00000467272 FMNL3Q8IVF7 1028 aa12.71□□□□□ -0.37
UBR4-211ENST00000467272 ZNF843Q8N446 348 aa12.71□□□□□ -0.37
UBR4-211ENST00000467272 KDM1BQ8NB78 822 aa12.71□□□□□ -0.37
UBR4-211ENST00000467272 PIP4K2CQ8TBX8 421 aa12.71□□□□□ -0.37
UBR4-211ENST00000467272 SNX19Q92543 992 aa12.71□□□□□ -0.37
UBR4-211ENST00000467272 NDRG1Q92597 394 aaKnown RBP12.71□□□□□ -0.37
UBR4-211ENST00000467272 TMEM176AQ96HP8 235 aa12.71□□□□□ -0.37
UBR4-211ENST00000467272 SLC6A18Q96N87 628 aa12.71□□□□□ -0.37
UBR4-211ENST00000467272 MTG2Q9H4K7 406 aa12.71□□□□□ -0.37
UBR4-211ENST00000467272 CISHQ9NSE2 258 aa12.71□□□□□ -0.37
UBR4-211ENST00000467272 INTS6Q9UL03 887 aaKnown RBP12.71□□□□□ -0.37
UBR4-211ENST00000467272 SCML1Q9UN30 329 aa12.71□□□□□ -0.37
UBR4-211ENST00000467272 SPTA1P02549 2419 aa12.71□□□□□ -0.38
UBR4-211ENST00000467272 YJEFN3A6XGL0 299 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 E7ENQ6 273 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 ENC1O14682 589 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 DNTTP04053 509 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 PDIA4P13667 645 aaKnown RBP12.7□□□□□ -0.38
UBR4-211ENST00000467272 TRIM21P19474 475 aaKnown RBP12.7□□□□□ -0.38
UBR4-211ENST00000467272 GTF2H1P32780 548 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 RXRGP48443 463 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 CCR5P51681 352 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 TARDBPQ13148 414 aaKnown RBP eCLIP12.7□□□□□ -0.38
UBR4-211ENST00000467272 DNAJC3Q13217 504 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 HNRNPA1L2Q32P51 320 aaKnown RBP12.7□□□□□ -0.38
UBR4-211ENST00000467272 INAVAQ3KP66 663 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 PKDCCQ504Y2 493 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 ZCWPW2Q504Y3 356 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 PRAMEF14Q5SWL7 426 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 C9orf64Q5T6V5 341 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 PIK3R6Q5UE93 754 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 ZNF776Q68DI1 518 aaPredicted RBP12.7□□□□□ -0.38
UBR4-211ENST00000467272 MSANTD2Q6P1R3 559 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 INTS8Q75QN2 995 aaKnown RBP12.7□□□□□ -0.38
UBR4-211ENST00000467272 GATAD2AQ86YP4 633 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 TTC39CQ8N584 583 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 ENGASEQ8NFI3 743 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 AZIN2Q96A70 460 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 TMA16Q96EY4 203 aaKnown RBP12.7□□□□□ -0.38
UBR4-211ENST00000467272 HEXIM2Q96MH2 286 aaKnown RBP12.7□□□□□ -0.38
UBR4-211ENST00000467272 ZNF396Q96N95 335 aaPredicted RBP12.7□□□□□ -0.38
UBR4-211ENST00000467272 ACE2Q9BYF1 805 aaPredicted RBP12.7□□□□□ -0.38
UBR4-211ENST00000467272 ULBP1Q9BZM6 244 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 ERVMER34-1Q9H9K5 563 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 TMEM8AQ9HCN3 771 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 OLA1Q9NTK5 396 aaKnown RBP12.7□□□□□ -0.38
UBR4-211ENST00000467272 SUN2Q9UH99 717 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 SERTAD1Q9UHV2 236 aa12.7□□□□□ -0.38
UBR4-211ENST00000467272 PIEZO2Q9H5I5 2752 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 ARID1BQ8NFD5 2236 aaPredicted RBP12.69□□□□□ -0.38
UBR4-211ENST00000467272 EIF4E1BA6NMX2 242 aaKnown RBP12.69□□□□□ -0.38
UBR4-211ENST00000467272 XPO1O14980 1071 aaKnown RBP12.69□□□□□ -0.38
UBR4-211ENST00000467272 LATO43561 262 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 RFPL3O75679 317 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 EPHA8P29322 1005 aaPredicted RBP12.69□□□□□ -0.38
UBR4-211ENST00000467272 SLC6A4P31645 630 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 HARS2P49590 506 aaKnown RBP12.69□□□□□ -0.38
UBR4-211ENST00000467272 NXPH1P58417 271 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 ILKQ13418 452 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 TTC31Q49AM3 519 aaPredicted RBP12.69□□□□□ -0.38
UBR4-211ENST00000467272 ZNF394Q53GI3 561 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 BSPRYQ5W0U4 402 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 NCEH1Q6PIU2 408 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 RSRC2Q7L4I2 434 aaKnown RBP12.69□□□□□ -0.38
UBR4-211ENST00000467272 ERICH1Q86X53 443 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 UBR7Q8N806 425 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 DCBLD1Q8N8Z6 715 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 FIBINQ8TAL6 211 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 KCTD13Q8WZ19 329 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 MYEOVQ96EZ4 313 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 CNDP2Q96KP4 475 aaKnown RBP12.69□□□□□ -0.38
UBR4-211ENST00000467272 FAM129BQ96TA1 746 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 SFMBT1Q9UHJ3 866 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 FZD4Q9ULV1 537 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 FRMD4BQ9Y2L6 1034 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 MYH10P35580 1976 aa12.69□□□□□ -0.38
UBR4-211ENST00000467272 ITIH6Q6UXX5 1313 aa12.68□□□□□ -0.38
UBR4-211ENST00000467272 YKT6O15498 198 aa12.68□□□□□ -0.38
UBR4-211ENST00000467272 SIN3BO75182 1162 aa12.68□□□□□ -0.38
UBR4-211ENST00000467272 LDOC1O95751 146 aaPredicted RBP12.68□□□□□ -0.38
UBR4-211ENST00000467272 MYL1P05976 194 aa12.68□□□□□ -0.38
UBR4-211ENST00000467272 ATP5BP06576 529 aaKnown RBP12.68□□□□□ -0.38
UBR4-211ENST00000467272 HNF1BP35680 557 aa12.68□□□□□ -0.38
UBR4-211ENST00000467272 ARID5AQ03989 594 aa12.68□□□□□ -0.38
UBR4-211ENST00000467272 TLE3Q04726 772 aa12.68□□□□□ -0.38
UBR4-211ENST00000467272 C6orf118Q5T5N4 469 aa12.68□□□□□ -0.38
UBR4-211ENST00000467272 HES3Q5TGS1 186 aa12.68□□□□□ -0.38
UBR4-211ENST00000467272 CEP135Q66GS9 1140 aa12.68□□□□□ -0.38
UBR4-211ENST00000467272 NADSYN1Q6IA69 706 aa12.68□□□□□ -0.38
UBR4-211ENST00000467272 SPATS2Q86XZ4 545 aaKnown RBP12.68□□□□□ -0.38
UBR4-211ENST00000467272 AADATQ8N5Z0 425 aa12.68□□□□□ -0.38
UBR4-211ENST00000467272 OR2T34Q8NGX1 318 aa12.68□□□□□ -0.38
UBR4-211ENST00000467272 PRICKLE1Q96MT3 831 aaPredicted RBP12.68□□□□□ -0.38
UBR4-211ENST00000467272 DCBLD2Q96PD2 775 aa12.68□□□□□ -0.38
UBR4-211ENST00000467272 IMPG2Q9BZV3 1241 aa12.68□□□□□ -0.38
UBR4-211ENST00000467272 NEUROG2Q9H2A3 272 aa12.68□□□□□ -0.38
UBR4-211ENST00000467272 UPF2Q9HAU5 1272 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms