RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 TBC1D3GQ6DHY5 549 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 TBC1D3CQ6IPX1 549 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 CPLX2Q6PUV4 134 aaKnown RBP13.23□□□□□ -0.29
UBR4-210ENST00000466969 DTX1Q86Y01 620 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 TBC1D3Q8IZP1 549 aaPredicted RBP13.23□□□□□ -0.29
UBR4-210ENST00000466969 MYCBPAPQ8TBZ2 947 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 GDAP2Q9NXN4 497 aa13.23□□□□□ -0.29
UBR4-210ENST00000466969 A0A0B4J269 797 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 SLC12A8A0AV02 714 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 LATO43561 262 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 NEBLO76041 1014 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 CNTN5O94779 1100 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 PDGFRBP09619 1106 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 HOXB4P17483 251 aaPredicted RBP13.22□□□□□ -0.29
UBR4-210ENST00000466969 CD82P27701 267 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 ATP5C1P36542 298 aaKnown RBP13.22□□□□□ -0.29
UBR4-210ENST00000466969 NUDT1P36639 197 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 DHX8Q14562 1220 aaKnown RBP13.22□□□□□ -0.29
UBR4-210ENST00000466969 EIF2S3LQ2VIR3 472 aaKnown RBP13.22□□□□□ -0.29
UBR4-210ENST00000466969 TSGA10IPQ3SY00 556 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 MDH1BQ5I0G3 518 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 PPP1R26Q5T8A7 1209 aaPredicted RBP13.22□□□□□ -0.29
UBR4-210ENST00000466969 SND1Q7KZF4 910 aaKnown RBP eCLIP13.22□□□□□ -0.29
UBR4-210ENST00000466969 NT5DC4Q86YG4 428 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 LRRC52Q8N7C0 313 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 OR6B3Q8NGW1 331 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 PRR7Q8TB68 274 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 TIPINQ9BVW5 301 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 REPIN1Q9BWE0 567 aaKnown RBP13.22□□□□□ -0.29
UBR4-210ENST00000466969 SLC2A11Q9BYW1 496 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 UNKQ9C0B0 810 aaKnown RBP13.22□□□□□ -0.29
UBR4-210ENST00000466969 ELOVL4Q9GZR5 314 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 RUBCNLQ9H714 662 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 PREBQ9HCU5 417 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 DDX19AQ9NUU7 478 aaKnown RBP13.22□□□□□ -0.29
UBR4-210ENST00000466969 DMTF1Q9Y222 760 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 TP53TG5Q9Y2B4 290 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 ZNF510Q9Y2H8 683 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 RP1P56715 2156 aa13.22□□□□□ -0.29
UBR4-210ENST00000466969 TBX18O95935 607 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 LDLRP01130 860 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 PLCG1P19174 1290 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 ATP1A2P50993 1020 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 CACNA2D1P54289 1103 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 ADPRHP54922 357 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 PPP2CBP62714 309 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 PPP2CAP67775 309 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 NR0B2Q15466 257 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 CST6Q15828 149 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 SOWAHAQ2M3V2 549 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 Q6ZNB5 142 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 DPH6Q7L8W6 267 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 MCEMP1Q8IX19 187 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 SCAMP5Q8TAC9 235 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 JPH3Q8WXH2 748 aaPredicted RBP13.21□□□□□ -0.29
UBR4-210ENST00000466969 RUSC1Q9BVN2 902 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 TMEM60Q9H2L4 133 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 BRMS1Q9HCU9 246 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 DNM3Q9UQ16 869 aa13.21□□□□□ -0.29
UBR4-210ENST00000466969 C10orf142B7Z368 130 aa13.2□□□□□ -0.3
UBR4-210ENST00000466969 PRAMEF26H0Y7S4 382 aa13.2□□□□□ -0.3
UBR4-210ENST00000466969 MUSKO15146 869 aa13.2□□□□□ -0.3
UBR4-210ENST00000466969 KRT19P08727 400 aa13.2□□□□□ -0.3
UBR4-210ENST00000466969 ZDHHC11BP0C7U3 371 aa13.2□□□□□ -0.3
UBR4-210ENST00000466969 MAT2AP31153 395 aaKnown RBP13.2□□□□□ -0.3
UBR4-210ENST00000466969 TFAMQ00059 246 aaKnown RBP13.2□□□□□ -0.3
UBR4-210ENST00000466969 EHHADHQ08426 723 aa13.2□□□□□ -0.3
UBR4-210ENST00000466969 NR5A1Q13285 461 aa13.2□□□□□ -0.3
UBR4-210ENST00000466969 FGL2Q14314 439 aa13.2□□□□□ -0.3
UBR4-210ENST00000466969 POM121L1PQ3SYA9 428 aa13.2□□□□□ -0.3
UBR4-210ENST00000466969 PERM1Q5SV97 790 aa13.2□□□□□ -0.3
UBR4-210ENST00000466969 RINT1Q6NUQ1 792 aa13.2□□□□□ -0.3
UBR4-210ENST00000466969 WFIKKN2Q8TEU8 576 aa13.2□□□□□ -0.3
UBR4-210ENST00000466969 DDI1Q8WTU0 396 aa13.2□□□□□ -0.3
UBR4-210ENST00000466969 APOBEC4Q8WW27 367 aaKnown RBP13.2□□□□□ -0.3
UBR4-210ENST00000466969 ESYT1Q9BSJ8 1104 aa13.2□□□□□ -0.3
UBR4-210ENST00000466969 ARHGAP20Q9P2F6 1191 aa13.2□□□□□ -0.3
UBR4-210ENST00000466969 CLEC4EQ9ULY5 219 aa13.2□□□□□ -0.3
UBR4-210ENST00000466969 R3HCC1Q9Y3T6 440 aaKnown RBP13.2□□□□□ -0.3
UBR4-210ENST00000466969 ZNF891A8MT65 544 aaPredicted RBP13.19□□□□□ -0.3
UBR4-210ENST00000466969 PIGRP01833 764 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 GOT1P17174 413 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 ITIH1P19827 911 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 SLC8A1P32418 973 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 KRT2P35908 639 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 PLA2G4AP47712 749 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 RPIAP49247 311 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 SLC5A3P53794 718 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 HNRNPKP61978 463 aaKnown RBP eCLIP13.19□□□□□ -0.3
UBR4-210ENST00000466969 PDE4CQ08493 712 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 RAD51AP2Q09MP3 1159 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 DRAP1Q14919 205 aaPredicted RBP13.19□□□□□ -0.3
UBR4-210ENST00000466969 BMT2Q1RMZ1 405 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 C1orf186Q6ZWK4 172 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 CHST9Q7L1S5 443 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 B3GNT8Q7Z7M8 397 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 MMAAQ8IVH4 418 aaKnown RBP13.19□□□□□ -0.3
UBR4-210ENST00000466969 CSGALNACT2Q8N6G5 542 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 IL22RA1Q8N6P7 574 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms