RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 CCDC33Q8N5R6 958 aa5.78□□□□□ -1.48
SMC4-205ENST00000465563 NEUROG1Q92886 237 aa5.78□□□□□ -1.48
SMC4-205ENST00000465563 CLMNQ96JQ2 1002 aa5.78□□□□□ -1.48
SMC4-205ENST00000465563 ABHD14AQ9BUJ0 271 aa5.78□□□□□ -1.48
SMC4-205ENST00000465563 PRDM16Q9HAZ2 1276 aa5.78□□□□□ -1.48
SMC4-205ENST00000465563 IFNA2P01563 188 aa5.77□□□□□ -1.49
SMC4-205ENST00000465563 MT3P25713 68 aa5.77□□□□□ -1.49
SMC4-205ENST00000465563 HOXA11P31270 313 aaPredicted RBP5.77□□□□□ -1.49
SMC4-205ENST00000465563 LTBQ06643 244 aa5.77□□□□□ -1.49
SMC4-205ENST00000465563 SLC5A9Q2M3M2 681 aa5.77□□□□□ -1.49
SMC4-205ENST00000465563 KRT27Q7Z3Y8 459 aa5.77□□□□□ -1.49
SMC4-205ENST00000465563 C14orf80Q86SX3 495 aa5.77□□□□□ -1.49
SMC4-205ENST00000465563 TTC8Q8TAM2 541 aa5.77□□□□□ -1.49
SMC4-205ENST00000465563 NUDCD2Q8WVJ2 157 aa5.77□□□□□ -1.49
SMC4-205ENST00000465563 MED30Q96HR3 178 aa5.77□□□□□ -1.49
SMC4-205ENST00000465563 HIF1ANQ9NWT6 349 aa5.77□□□□□ -1.49
SMC4-205ENST00000465563 MYO1AQ9UBC5 1043 aa5.77□□□□□ -1.49
SMC4-205ENST00000465563 G3BP2Q9UN86 482 aaKnown RBP5.77□□□□□ -1.49
SMC4-205ENST00000465563 NOTCH4Q99466 2003 aa5.77□□□□□ -1.49
SMC4-205ENST00000465563 M0QZQ0 153 aa5.76□□□□□ -1.49
SMC4-205ENST00000465563 ACOT8O14734 319 aa5.76□□□□□ -1.49
SMC4-205ENST00000465563 KRT86O43790 486 aa5.76□□□□□ -1.49
SMC4-205ENST00000465563 FGF3P11487 239 aaPredicted RBP5.76□□□□□ -1.49
SMC4-205ENST00000465563 EGR4Q05215 589 aa5.76□□□□□ -1.49
SMC4-205ENST00000465563 KRT81Q14533 505 aa5.76□□□□□ -1.49
SMC4-205ENST00000465563 ASPHD1Q5U4P2 390 aa5.76□□□□□ -1.49
SMC4-205ENST00000465563 C16orf89Q6UX73 402 aa5.76□□□□□ -1.49
SMC4-205ENST00000465563 RNF152Q8N8N0 203 aa5.76□□□□□ -1.49
SMC4-205ENST00000465563 SRFBP1Q8NEF9 429 aaKnown RBP5.76□□□□□ -1.49
SMC4-205ENST00000465563 OR52N4Q8NGI2 321 aa5.76□□□□□ -1.49
SMC4-205ENST00000465563 INPP5DQ92835 1189 aa5.76□□□□□ -1.49
SMC4-205ENST00000465563 TSR2Q969E8 191 aaKnown RBP5.76□□□□□ -1.49
SMC4-205ENST00000465563 TTC17Q96AE7 1141 aa5.76□□□□□ -1.49
SMC4-205ENST00000465563 SIRT3Q9NTG7 399 aaPredicted RBP5.76□□□□□ -1.49
SMC4-205ENST00000465563 FBXO28Q9NVF7 368 aa5.76□□□□□ -1.49
SMC4-205ENST00000465563 PLK2Q9NYY3 685 aa5.76□□□□□ -1.49
SMC4-205ENST00000465563 KPNA5O15131 536 aa5.75□□□□□ -1.49
SMC4-205ENST00000465563 MDM4O15151 490 aa5.75□□□□□ -1.49
SMC4-205ENST00000465563 PPP6R2O75170 966 aa5.75□□□□□ -1.49
SMC4-205ENST00000465563 TSHRP16473 764 aa5.75□□□□□ -1.49
SMC4-205ENST00000465563 EGR1P18146 543 aa5.75□□□□□ -1.49
SMC4-205ENST00000465563 RFX2P48378 723 aa5.75□□□□□ -1.49
SMC4-205ENST00000465563 ENTPD1P49961 510 aa5.75□□□□□ -1.49
SMC4-205ENST00000465563 ARHGAP15Q53QZ3 475 aa5.75□□□□□ -1.49
SMC4-205ENST00000465563 KIAA1755Q5JYT7 1200 aa5.75□□□□□ -1.49
SMC4-205ENST00000465563 TTC39AQ5SRH9 613 aa5.75□□□□□ -1.49
SMC4-205ENST00000465563 SLC39A5Q6ZMH5 540 aa5.75□□□□□ -1.49
SMC4-205ENST00000465563 ZNF347Q96SE7 839 aa5.75□□□□□ -1.49
SMC4-205ENST00000465563 SPAG4Q9NPE6 437 aa5.75□□□□□ -1.49
SMC4-205ENST00000465563 GJB4Q9NTQ9 266 aa5.75□□□□□ -1.49
SMC4-205ENST00000465563 WNT16Q9UBV4 365 aa5.75□□□□□ -1.49
SMC4-205ENST00000465563 UBE2J1Q9Y385 318 aaPredicted RBP5.75□□□□□ -1.49
SMC4-205ENST00000465563 A0A1W2PPC4 97 aa5.74□□□□□ -1.49
SMC4-205ENST00000465563 NPC1O15118 1278 aa5.74□□□□□ -1.49
SMC4-205ENST00000465563 SRGAP2BP0DMP2 458 aa5.74□□□□□ -1.49
SMC4-205ENST00000465563 PECAM1P16284 738 aaPredicted RBP5.74□□□□□ -1.49
SMC4-205ENST00000465563 TGM2P21980 687 aa5.74□□□□□ -1.49
SMC4-205ENST00000465563 GABRB3P28472 473 aa5.74□□□□□ -1.49
SMC4-205ENST00000465563 SLC37A1P57057 533 aa5.74□□□□□ -1.49
SMC4-205ENST00000465563 NFATC4Q14934 902 aa5.74□□□□□ -1.49
SMC4-205ENST00000465563 WASHC2DQ5SRD0 308 aa5.74□□□□□ -1.49
SMC4-205ENST00000465563 LCE1EQ5T753 118 aa5.74□□□□□ -1.49
SMC4-205ENST00000465563 HMBOX1Q6NT76 420 aa5.74□□□□□ -1.49
SMC4-205ENST00000465563 CYB5R4Q7L1T6 521 aa5.74□□□□□ -1.49
SMC4-205ENST00000465563 TTC30AQ86WT1 665 aa5.74□□□□□ -1.49
SMC4-205ENST00000465563 COLEC11Q9BWP8 271 aa5.74□□□□□ -1.49
SMC4-205ENST00000465563 DDX21Q9NR30 783 aaKnown RBP eCLIP5.74□□□□□ -1.49
SMC4-205ENST00000465563 TXLNGQ9NUQ3 528 aa5.74□□□□□ -1.49
SMC4-205ENST00000465563 PCDHB7Q9Y5E2 793 aa5.74□□□□□ -1.49
SMC4-205ENST00000465563 INSL5Q9Y5Q6 135 aa5.74□□□□□ -1.49
SMC4-205ENST00000465563 APOL1O14791 398 aa5.73□□□□□ -1.49
SMC4-205ENST00000465563 CNTN5O94779 1100 aa5.73□□□□□ -1.49
SMC4-205ENST00000465563 NFATC1O95644 943 aa5.73□□□□□ -1.49
SMC4-205ENST00000465563 ATF3P18847 181 aa5.73□□□□□ -1.49
SMC4-205ENST00000465563 CASP5P51878 434 aa5.73□□□□□ -1.49
SMC4-205ENST00000465563 NSUN2Q08J23 767 aaKnown RBP eCLIP5.73□□□□□ -1.49
SMC4-205ENST00000465563 KEAP1Q14145 624 aa5.73□□□□□ -1.49
SMC4-205ENST00000465563 SLC4A8Q2Y0W8 1093 aa5.73□□□□□ -1.49
SMC4-205ENST00000465563 PARM1Q6UWI2 310 aa5.73□□□□□ -1.49
SMC4-205ENST00000465563 TRILQ7L0X0 811 aa5.73□□□□□ -1.49
SMC4-205ENST00000465563 PAQR4Q8N4S7 273 aaPredicted RBP5.73□□□□□ -1.49
SMC4-205ENST00000465563 ELP5Q8TE02 316 aa5.73□□□□□ -1.49
SMC4-205ENST00000465563 NPIPB3Q92617 1050 aa5.73□□□□□ -1.49
SMC4-205ENST00000465563 TIFAQ96CG3 184 aa5.73□□□□□ -1.49
SMC4-205ENST00000465563 EIF2AQ9BY44 585 aaKnown RBP5.73□□□□□ -1.49
SMC4-205ENST00000465563 ISCUQ9H1K1 167 aa5.73□□□□□ -1.49
SMC4-205ENST00000465563 MYO6Q9UM54 1294 aa5.73□□□□□ -1.49
SMC4-205ENST00000465563 GAGE12JA6NER3 117 aa5.72□□□□□ -1.49
SMC4-205ENST00000465563 FOXO6A8MYZ6 492 aa5.72□□□□□ -1.49
SMC4-205ENST00000465563 NDST3O95803 873 aa5.72□□□□□ -1.49
SMC4-205ENST00000465563 KLKB1P03952 638 aa5.72□□□□□ -1.49
SMC4-205ENST00000465563 ACAA1P09110 424 aaPredicted RBP5.72□□□□□ -1.49
SMC4-205ENST00000465563 STT3AP46977 705 aa5.72□□□□□ -1.49
SMC4-205ENST00000465563 CSHL1Q14406 222 aa5.72□□□□□ -1.49
SMC4-205ENST00000465563 MAPKAPK3Q16644 382 aa5.72□□□□□ -1.49
SMC4-205ENST00000465563 ZNF628Q5EBL2 1059 aa5.72□□□□□ -1.49
SMC4-205ENST00000465563 MSANTD2Q6P1R3 559 aa5.72□□□□□ -1.49
SMC4-205ENST00000465563 WDR93Q6P2C0 686 aa5.72□□□□□ -1.49
SMC4-205ENST00000465563 ADPRHL1Q8NDY3 354 aa5.72□□□□□ -1.49
SMC4-205ENST00000465563 C7orf57Q8NEG2 295 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms