RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 ABCB4P21439 1286 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 RRM1P23921 792 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 PMLP29590 882 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 SDC4P31431 198 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 GALCP54803 685 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 SEC13P55735 322 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 PTP4A2Q12974 167 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 RNF43Q68DV7 783 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 PLEKHA7Q6IQ23 1121 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 SCD5Q86SK9 330 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 RASSF3Q86WH2 238 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 ADGRG2Q8IZP9 1017 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 TPSD1Q9BZJ3 242 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 TAS2R14Q9NYV8 317 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 ANGPTL2Q9UKU9 493 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 INVSQ9Y283 1065 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 SLC9A3R1O14745 358 aaPredicted RBP18.12■□□□□ 0.49
CPSF4-209ENST00000465132 MBL2P11226 248 aaPredicted RBP18.12■□□□□ 0.49
CPSF4-209ENST00000465132 RNASE9P60153 205 aaKnown RBP18.12■□□□□ 0.49
CPSF4-209ENST00000465132 NNTQ13423 1086 aa18.12■□□□□ 0.49
CPSF4-209ENST00000465132 IFI16Q16666 785 aaKnown RBP18.12■□□□□ 0.49
CPSF4-209ENST00000465132 USP39Q53GS9 565 aaKnown RBP18.12■□□□□ 0.49
CPSF4-209ENST00000465132 DCAF6Q58WW2 860 aa18.12■□□□□ 0.49
CPSF4-209ENST00000465132 ACBD5Q5T8D3 534 aaPredicted RBP18.12■□□□□ 0.49
CPSF4-209ENST00000465132 MSANTD2Q6P1R3 559 aa18.12■□□□□ 0.49
CPSF4-209ENST00000465132 KIAA1328Q86T90 577 aa18.12■□□□□ 0.49
CPSF4-209ENST00000465132 C11orf74Q86VG3 221 aa18.12■□□□□ 0.49
CPSF4-209ENST00000465132 SLC2A13Q96QE2 648 aa18.12■□□□□ 0.49
CPSF4-209ENST00000465132 DCLK3Q9C098 648 aa18.12■□□□□ 0.49
CPSF4-209ENST00000465132 SMPD4Q9NXE4 827 aa18.12■□□□□ 0.49
CPSF4-209ENST00000465132 MARCH2Q9P0N8 246 aa18.12■□□□□ 0.49
CPSF4-209ENST00000465132 SLC12A6Q9UHW9 1150 aa18.12■□□□□ 0.49
CPSF4-209ENST00000465132 MMP17Q9ULZ9 603 aa18.12■□□□□ 0.49
CPSF4-209ENST00000465132 NENFQ9UMX5 172 aa18.12■□□□□ 0.49
CPSF4-209ENST00000465132 HBS1LQ9Y450 684 aaKnown RBP18.12■□□□□ 0.49
CPSF4-209ENST00000465132 PCDHA13Q9Y5I0 950 aa18.12■□□□□ 0.49
CPSF4-209ENST00000465132 KIAA1549LQ6ZVL6 1849 aa18.12■□□□□ 0.49
CPSF4-209ENST00000465132 HELZP42694 1942 aaKnown RBP18.11■□□□□ 0.49
CPSF4-209ENST00000465132 CNOT1A5YKK6 2376 aaKnown RBP18.11■□□□□ 0.49
CPSF4-209ENST00000465132 GABBR2O75899 941 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 KCNK5O95279 499 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 CYP1A2P05177 515 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 MRPS21P82921 87 aaKnown RBP18.11■□□□□ 0.49
CPSF4-209ENST00000465132 KIF5AQ12840 1032 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 MAMLD1Q13495 774 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 ACAP1Q15027 740 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 DHCR24Q15392 516 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 SLC25A52Q3SY17 297 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 PMS2CLQ68D20 193 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 ANO7Q6IWH7 933 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 BHLHA9Q7RTU4 235 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 TMEM139Q8IV31 216 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 UNC45BQ8IWX7 931 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 CCDC33Q8N5R6 958 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 OLIG1Q8TAK6 271 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 FNIP1Q8TF40 1166 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 CLEC4CQ8WTT0 213 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 EDEM1Q92611 657 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 EDEM2Q9BV94 578 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 TSGA10Q9BZW7 698 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 THAP2Q9H0W7 228 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 CCSER2Q9H7U1 834 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 NMUR1Q9HB89 426 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 METTL5Q9NRN9 209 aaKnown RBP18.11■□□□□ 0.49
CPSF4-209ENST00000465132 CTTNBP2NLQ9P2B4 639 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 CFAP97Q9P2B7 532 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 MYO1AQ9UBC5 1043 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 TMEM59LQ9UK28 342 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 LSM7Q9UK45 103 aaKnown RBP18.11■□□□□ 0.49
CPSF4-209ENST00000465132 ZNF510Q9Y2H8 683 aa18.11■□□□□ 0.49
CPSF4-209ENST00000465132 SCAMP3O14828 347 aaKnown RBP18.1■□□□□ 0.49
CPSF4-209ENST00000465132 COCHO43405 550 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 RNF8O76064 485 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 CCDC175P0C221 793 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 PDGFRAP16234 1089 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 GPD1P21695 349 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 PTPN9P43378 593 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 SLC6A11P48066 632 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 SHC2P98077 582 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 MESP2Q0VG99 397 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 EFEMP1Q12805 493 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 CRY1Q16526 586 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 RHBDF2Q6PJF5 856 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 DEFB106AQ8N104 65 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 MDGA1Q8NFP4 955 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 PLD4Q96BZ4 506 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 FAM204AQ9H8W3 233 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 TJP2Q9UDY2 1190 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 RASAL2Q9UJF2 1139 aa18.1■□□□□ 0.49
CPSF4-209ENST00000465132 CHD8Q9HCK8 2581 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 A0A0A6YYK5 440 aaPredicted RBP18.09■□□□□ 0.49
CPSF4-209ENST00000465132 MYO1FO00160 1098 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 CCP110O43303 1012 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 CHRM1P11229 460 aaPredicted RBP18.09■□□□□ 0.49
CPSF4-209ENST00000465132 HNRNPLP14866 589 aaKnown RBP eCLIP18.09■□□□□ 0.49
CPSF4-209ENST00000465132 BCKDHBP21953 392 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 EIF2DP41214 584 aaKnown RBP18.09■□□□□ 0.49
CPSF4-209ENST00000465132 ARHGAP25P42331 645 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 HARS2P49590 506 aaKnown RBP18.09■□□□□ 0.49
CPSF4-209ENST00000465132 VAV2P52735 878 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms