RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 OSBPL2Q9H1P3 480 aa22.39■■□□□ 1.17
PDLIM2-216ENST00000464275 PRDM12Q9H4Q4 367 aa22.39■■□□□ 1.17
PDLIM2-216ENST00000464275 PAK6Q9NQU5 681 aaPredicted RBP22.39■■□□□ 1.17
PDLIM2-216ENST00000464275 NCAM2O15394 837 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 HOXA2O43364 376 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 IFRD2Q12894 506 aaPredicted RBP22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 MTM1Q13496 603 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 GBP7Q8N8V2 638 aaPredicted RBP22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 CCNYQ8ND76 341 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 SGSM3Q96HU1 749 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 C8orf48Q96LL4 319 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 CYTH2Q99418 400 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 DHRS4Q9BTZ2 278 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 OR12D3Q9UGF7 316 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 PCDHB5Q9Y5E4 795 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 AVILO75366 819 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 ALDH2P05091 517 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 SARNPP82979 210 aaKnown RBP22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 CDK16Q00536 496 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 MRPL58Q14197 206 aaKnown RBP22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 CTXN3Q4LDR2 81 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 BRMS1LQ5PSV4 323 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 ADGRD1Q6QNK2 874 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 COLGALT1Q8NBJ5 622 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 BRD8Q9H0E9 1235 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 XAB2Q9HCS7 855 aaKnown RBP22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 ARHGEF38Q9NXL2 777 aa22.38■■□□□ 1.17
PDLIM2-216ENST00000464275 HTTP42858 3142 aa22.37■■□□□ 1.17
PDLIM2-216ENST00000464275 OR6C75A6NL08 312 aa22.37■■□□□ 1.17
PDLIM2-216ENST00000464275 RNF103O00237 685 aa22.37■■□□□ 1.17
PDLIM2-216ENST00000464275 CHUKO15111 745 aa22.37■■□□□ 1.17
PDLIM2-216ENST00000464275 IRAK2O43187 625 aa22.37■■□□□ 1.17
PDLIM2-216ENST00000464275 OAS1P00973 400 aaKnown RBP22.37■■□□□ 1.17
PDLIM2-216ENST00000464275 GSTA2P09210 222 aa22.37■■□□□ 1.17
PDLIM2-216ENST00000464275 KRT15P19012 456 aa22.37■■□□□ 1.17
PDLIM2-216ENST00000464275 MAGEA3P43357 314 aa22.37■■□□□ 1.17
PDLIM2-216ENST00000464275 MAGEA11P43364 429 aa22.37■■□□□ 1.17
PDLIM2-216ENST00000464275 GTF2A1P52655 376 aaPredicted RBP22.37■■□□□ 1.17
PDLIM2-216ENST00000464275 PKN2Q16513 984 aaKnown RBP22.37■■□□□ 1.17
PDLIM2-216ENST00000464275 FAM171A1Q5VUB5 890 aa22.37■■□□□ 1.17
PDLIM2-216ENST00000464275 DEFB118Q96PH6 123 aa22.37■■□□□ 1.17
PDLIM2-216ENST00000464275 PAFAH2Q99487 392 aa22.37■■□□□ 1.17
PDLIM2-216ENST00000464275 SMOC2Q9H3U7 446 aa22.37■■□□□ 1.17
PDLIM2-216ENST00000464275 SNX3O60493 162 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 SERPINB6P35237 376 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 MSH2P43246 934 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 MNAT1P51948 309 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 ZNF280DQ6N043 979 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 DENND5BQ6ZUT9 1274 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 SCD5Q86SK9 330 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 NPAS4Q8IUM7 802 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 NUP93Q8N1F7 819 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 AGGF1Q8N302 714 aaeCLIP22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 MAGEC3Q8TD91 643 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 CKAP2Q8WWK9 683 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 TRABDQ9H4I3 376 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 EIF2B3Q9NR50 452 aaKnown RBP22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 NKIRAS1Q9NYS0 192 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 OGDHLQ9ULD0 1010 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 SLC12A4Q9UP95 1085 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 NR2E3Q9Y5X4 410 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 FGFR3P22607 806 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 GATMP50440 423 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 EFTUD2Q15029 972 aaKnown RBP eCLIP22.36■■□□□ 1.176e-8■■■■□ 20.2
PDLIM2-216ENST00000464275 ZNF534Q76KX8 674 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 TRPM8Q7Z2W7 1104 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 CEP57Q86XR8 500 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 ANKRD42Q8N9B4 389 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 NETO2Q8NC67 525 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 MRRFQ96E11 262 aaKnown RBP22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 HAPLN3Q96S86 360 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 TMEM175Q9BSA9 504 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 MRPL9Q9BYD2 267 aaKnown RBP22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 FBXO44Q9H4M3 255 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 SCML2Q9UQR0 700 aa22.36■■□□□ 1.17
PDLIM2-216ENST00000464275 CFAP73A6NFT4 308 aa22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 PQBP1O60828 265 aaKnown RBP22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 LRIG2O94898 1065 aa22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 SUN1O94901 812 aa22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 MX2P20592 715 aa22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 STX2P32856 288 aa22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 HTRA3P83110 453 aa22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 WASHC5Q12768 1159 aa22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 PARP6Q2NL67 630 aa22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 MGARPQ8TDB4 240 aa22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 CFAP36Q96G28 342 aa22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 ELAC2Q9BQ52 826 aaKnown RBP22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 MARCH5Q9NX47 278 aa22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 SEPT10Q9P0V9 454 aa22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 ZC3H7BQ9UGR2 993 aaKnown RBP22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 USP15Q9Y4E8 981 aaPredicted RBP22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 SNX10Q9Y5X0 201 aa22.35■■□□□ 1.17
PDLIM2-216ENST00000464275 TCRBV9S1A1TA0A576 114 aa22.34■■□□□ 1.17
PDLIM2-216ENST00000464275 MLNP12872 115 aa22.34■■□□□ 1.17
PDLIM2-216ENST00000464275 EPHB2P29323 1055 aa22.34■■□□□ 1.17
PDLIM2-216ENST00000464275 HTR7P34969 479 aa22.34■■□□□ 1.17
PDLIM2-216ENST00000464275 SLC11A1P49279 550 aa22.34■■□□□ 1.17
PDLIM2-216ENST00000464275 SLC18A1P54219 525 aa22.34■■□□□ 1.17
PDLIM2-216ENST00000464275 PPIDQ08752 370 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-216ENST00000464275 ELAVL2Q12926 359 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms