RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 CCDC173Q0VFZ6 552 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 ILKQ13418 452 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 SLC45A4Q5BKX6 768 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 RAB41Q5JT25 222 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 NCEH1Q6PIU2 408 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 SHC4Q6S5L8 630 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 PIGZQ86VD9 579 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 OR2T34Q8NGX1 318 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 TSC1Q92574 1164 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 ZNF396Q96N95 335 aaPredicted RBP15.08■□□□□ 0
SMC1A-204ENST00000463684 OMDQ99983 421 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 MTMR6Q9Y217 621 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 BRINP1O60477 761 aa15.07■□□□□ 0
SMC1A-204ENST00000463684 RNASEH2AO75792 299 aaKnown RBP15.07■□□□□ 0
SMC1A-204ENST00000463684 LATS1O95835 1130 aa15.07■□□□□ 0
SMC1A-204ENST00000463684 WNT1P04628 370 aa15.07■□□□□ 0
SMC1A-204ENST00000463684 CKMT2P17540 419 aa15.07■□□□□ 0
SMC1A-204ENST00000463684 GLDCP23378 1020 aa15.07■□□□□ 0
SMC1A-204ENST00000463684 STK4Q13043 487 aa15.07■□□□□ 0
SMC1A-204ENST00000463684 SHBQ15464 509 aa15.07■□□□□ 0
SMC1A-204ENST00000463684 TAF1BQ53T94 588 aaPredicted RBP15.07■□□□□ 0
SMC1A-204ENST00000463684 C1orf220Q5T0J3 134 aa15.07■□□□□ 0
SMC1A-204ENST00000463684 PM20D1Q6GTS8 502 aa15.07■□□□□ 0
SMC1A-204ENST00000463684 ZC3H3Q8IXZ2 948 aaKnown RBP15.07■□□□□ 0
SMC1A-204ENST00000463684 TTC39CQ8N584 583 aa15.07■□□□□ 0
SMC1A-204ENST00000463684 ZNF557Q8N988 423 aaPredicted RBP15.07■□□□□ 0
SMC1A-204ENST00000463684 TAS1R2Q8TE23 839 aa15.07■□□□□ 0
SMC1A-204ENST00000463684 NEUROG2Q9H2A3 272 aa15.07■□□□□ 0
SMC1A-204ENST00000463684 EXOC1Q9NV70 894 aa15.07■□□□□ 0
SMC1A-204ENST00000463684 STOML2Q9UJZ1 356 aa15.07■□□□□ 0
SMC1A-204ENST00000463684 MYH10P35580 1976 aa15.07■□□□□ 0
SMC1A-204ENST00000463684 CKAP5Q14008 2032 aa15.07■□□□□ 0
SMC1A-204ENST00000463684 SHROOM3Q8TF72 1996 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 A0A1W2PP55 124 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 ERVH48-1M5A8F1 160 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 TLR4O00206 839 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 TBL1XO60907 577 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 PDIA4P13667 645 aaKnown RBP15.06■□□□□ 0
SMC1A-204ENST00000463684 EPHA8P29322 1005 aaPredicted RBP15.06■□□□□ 0
SMC1A-204ENST00000463684 GCLMP48507 274 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 TLE3Q04726 772 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 BNIP3Q12983 259 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 CST6Q15828 149 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 KMT5BQ4FZB7 885 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 MPP7Q5T2T1 576 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 CEP57L1Q8IYX8 460 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 CACTIN-AS1Q8N1I8 211 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 OXR1Q8N573 874 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 ANKRD52Q8NB46 1076 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 SERAC1Q96JX3 654 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 IPO9Q96P70 1041 aaKnown RBP15.06■□□□□ 0
SMC1A-204ENST00000463684 ULBP1Q9BZM6 244 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 KCTD10Q9H3F6 313 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 MTG2Q9H4K7 406 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 EBF2Q9HAK2 575 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 LRRC4Q9HBW1 653 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 FAM13BQ9NYF5 915 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 SFMBT1Q9UHJ3 866 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 FZD4Q9ULV1 537 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 TPX2Q9ULW0 747 aaKnown RBP15.06■□□□□ 0
SMC1A-204ENST00000463684 CLCA2Q9UQC9 943 aa15.06■□□□□ 0
SMC1A-204ENST00000463684 COL5A1P20908 1838 aaPredicted RBP15.06■□□□□ 0
SMC1A-204ENST00000463684 MAPK13O15264 365 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 MID1O15344 667 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 CALUO43852 315 aaPredicted RBP15.05■□□□□ -0
SMC1A-204ENST00000463684 SIN3BO75182 1162 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 YEATS4O95619 227 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 KRT13P13646 458 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 CD70P32970 193 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 CCR5P51681 352 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 HNRNPA1L2Q32P51 320 aaKnown RBP15.05■□□□□ -0
SMC1A-204ENST00000463684 TBC1D25Q3MII6 688 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 BROXQ5VW32 411 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 INTS8Q75QN2 995 aaKnown RBP15.05■□□□□ -0
SMC1A-204ENST00000463684 MMAAQ8IVH4 418 aaKnown RBP15.05■□□□□ -0
SMC1A-204ENST00000463684 DHX40Q8IX18 779 aaKnown RBP15.05■□□□□ -0
SMC1A-204ENST00000463684 SPACA3Q8IXA5 215 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 NDRG1Q92597 394 aaKnown RBP15.05■□□□□ -0
SMC1A-204ENST00000463684 EDEM1Q92611 657 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 TTC17Q96AE7 1141 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 LGMNQ99538 433 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 IRX2Q9BZI1 471 aaPredicted RBP15.05■□□□□ -0
SMC1A-204ENST00000463684 MMRN2Q9H8L6 949 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 ERVMER34-1Q9H9K5 563 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 ABCC13Q9NSE7 274 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 SERGEFQ9UGK8 458 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 ADAMTS1Q9UHI8 967 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 TMEM131Q92545 1883 aa15.05■□□□□ -0
SMC1A-204ENST00000463684 CABIN1Q9Y6J0 2220 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 A0A1W2PR77 199 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 IRAK2O43187 625 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 ASLP04424 464 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 SLC8A1P32418 973 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 RXRGP48443 463 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 SLC11A2P49281 568 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 SGSHP51688 502 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 NXPH1P58417 271 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 E2F1Q01094 437 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 KCNH2Q12809 1159 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 KCNJ12Q14500 433 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms