RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 PCDHA11Q9Y5I1 949 aa19.61■□□□□ 0.73
CCDC78-206ENST00000463539 GREB1Q4ZG55 1949 aa19.61■□□□□ 0.73
CCDC78-206ENST00000463539 KCNN4O15554 427 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 COCHO43405 550 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 SASH3O75995 380 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 RBL1P28749 1068 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 SERPINB6P35237 376 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 MLLT6P55198 1093 aaPredicted RBP19.6■□□□□ 0.73
CCDC78-206ENST00000463539 NRG1Q02297 640 aaPredicted RBP19.6■□□□□ 0.73
CCDC78-206ENST00000463539 CAV1Q03135 178 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 MTA1Q13330 715 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 PIK3R6Q5UE93 754 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 MANEALQ5VSG8 457 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 IZUMO3Q5VZ72 239 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 LRRC45Q96CN5 670 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 USP29Q9HBJ7 922 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 NEU3Q9UQ49 428 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 RAD54BQ9Y620 910 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 HACD1B0YJ81 288 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 E9PAM4 449 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 FGF10O15520 208 aaPredicted RBP19.6■□□□□ 0.73
CCDC78-206ENST00000463539 HOXC13P31276 330 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 ITGA8P53708 1063 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 PDK1Q15118 436 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 ELMOD1Q8N336 334 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 TFB1MQ8WVM0 346 aaKnown RBP19.6■□□□□ 0.73
CCDC78-206ENST00000463539 RTP4Q96DX8 246 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 ZNF334Q9HCZ1 680 aaPredicted RBP19.6■□□□□ 0.73
CCDC78-206ENST00000463539 ANAPC5Q9UJX4 755 aa19.6■□□□□ 0.73
CCDC78-206ENST00000463539 MAP2K7O14733 419 aa19.59■□□□□ 0.73
CCDC78-206ENST00000463539 PPP1R12AO14974 1030 aaPredicted RBP19.59■□□□□ 0.73
CCDC78-206ENST00000463539 TP73O15350 636 aa19.59■□□□□ 0.73
CCDC78-206ENST00000463539 IRS1P35568 1242 aa19.59■□□□□ 0.73
CCDC78-206ENST00000463539 ACTN2P35609 894 aa19.59■□□□□ 0.73
CCDC78-206ENST00000463539 CLCN4P51793 760 aa19.59■□□□□ 0.73
CCDC78-206ENST00000463539 CAMK1Q14012 370 aa19.59■□□□□ 0.73
CCDC78-206ENST00000463539 PABPC1LQ4VXU2 614 aaKnown RBP19.59■□□□□ 0.73
CCDC78-206ENST00000463539 MS4A13Q5J8X5 152 aa19.59■□□□□ 0.73
CCDC78-206ENST00000463539 ACBD5Q5T8D3 534 aaPredicted RBP19.59■□□□□ 0.73
CCDC78-206ENST00000463539 NPWQ8N729 165 aa19.59■□□□□ 0.73
CCDC78-206ENST00000463539 LRRN4Q8WUT4 740 aa19.59■□□□□ 0.73
CCDC78-206ENST00000463539 CATSPERBQ9H7T0 1116 aa19.59■□□□□ 0.73
CCDC78-206ENST00000463539 ZNF638Q14966 1978 aaKnown RBP19.59■□□□□ 0.73
CCDC78-206ENST00000463539 DNALI1O14645 258 aaPredicted RBP19.58■□□□□ 0.73
CCDC78-206ENST00000463539 NDC80O14777 642 aa19.58■□□□□ 0.73
CCDC78-206ENST00000463539 OAS1P00973 400 aaKnown RBP19.58■□□□□ 0.73
CCDC78-206ENST00000463539 RPL22P35268 128 aaKnown RBP19.58■□□□□ 0.73
CCDC78-206ENST00000463539 HEATR6Q6AI08 1181 aaKnown RBP19.58■□□□□ 0.73
CCDC78-206ENST00000463539 TMEM150AQ86TG1 271 aa19.58■□□□□ 0.73
CCDC78-206ENST00000463539 MREGQ8N565 214 aa19.58■□□□□ 0.73
CCDC78-206ENST00000463539 NETO2Q8NC67 525 aa19.58■□□□□ 0.73
CCDC78-206ENST00000463539 LGMNQ99538 433 aa19.58■□□□□ 0.73
CCDC78-206ENST00000463539 TPX2Q9ULW0 747 aaKnown RBP19.58■□□□□ 0.73
CCDC78-206ENST00000463539 YBX2Q9Y2T7 364 aaKnown RBP19.58■□□□□ 0.73
CCDC78-206ENST00000463539 CEP290O15078 2479 aa19.58■□□□□ 0.73
CCDC78-206ENST00000463539 C2orf78A6NCI8 922 aa19.58■□□□□ 0.72
CCDC78-206ENST00000463539 NCAM2O15394 837 aa19.58■□□□□ 0.72
CCDC78-206ENST00000463539 F11P03951 625 aa19.58■□□□□ 0.72
CCDC78-206ENST00000463539 HSPA9P38646 679 aaKnown RBP19.58■□□□□ 0.72
CCDC78-206ENST00000463539 KCNQ1P51787 676 aa19.58■□□□□ 0.72
CCDC78-206ENST00000463539 NRLP54845 237 aa19.58■□□□□ 0.72
CCDC78-206ENST00000463539 ERVK-21P61565 698 aa19.58■□□□□ 0.72
CCDC78-206ENST00000463539 COG7P83436 770 aa19.58■□□□□ 0.72
CCDC78-206ENST00000463539 AUHQ13825 339 aaKnown RBP19.58■□□□□ 0.72
CCDC78-206ENST00000463539 PPM1LQ5SGD2 360 aa19.58■□□□□ 0.72
CCDC78-206ENST00000463539 LRRC31Q6UY01 552 aa19.58■□□□□ 0.72
CCDC78-206ENST00000463539 TMC3Q7Z5M5 1100 aa19.58■□□□□ 0.72
CCDC78-206ENST00000463539 C14orf80Q86SX3 495 aa19.58■□□□□ 0.72
CCDC78-206ENST00000463539 FERMT1Q9BQL6 677 aa19.58■□□□□ 0.72
CCDC78-206ENST00000463539 IL21Q9HBE4 155 aa19.58■□□□□ 0.72
CCDC78-206ENST00000463539 VANGL2Q9ULK5 521 aa19.58■□□□□ 0.72
CCDC78-206ENST00000463539 MX2P20592 715 aa19.57■□□□□ 0.72
CCDC78-206ENST00000463539 HARS2P49590 506 aaKnown RBP19.57■□□□□ 0.72
CCDC78-206ENST00000463539 DHX9Q08211 1270 aaKnown RBP19.57■□□□□ 0.72
CCDC78-206ENST00000463539 GPM6BQ13491 265 aa19.57■□□□□ 0.72
CCDC78-206ENST00000463539 PRKD1Q15139 912 aaPredicted RBP19.57■□□□□ 0.72
CCDC78-206ENST00000463539 HIBCHQ6NVY1 386 aaPredicted RBP19.57■□□□□ 0.72
CCDC78-206ENST00000463539 RHBDF2Q6PJF5 856 aa19.57■□□□□ 0.72
CCDC78-206ENST00000463539 CCNYQ8ND76 341 aa19.57■□□□□ 0.72
CCDC78-206ENST00000463539 HTR3CQ8WXA8 447 aa19.57■□□□□ 0.72
CCDC78-206ENST00000463539 PLD4Q96BZ4 506 aa19.57■□□□□ 0.72
CCDC78-206ENST00000463539 ADAM7Q9H2U9 754 aa19.57■□□□□ 0.72
CCDC78-206ENST00000463539 PRDM12Q9H4Q4 367 aa19.57■□□□□ 0.72
CCDC78-206ENST00000463539 VIPAS39Q9H9C1 493 aa19.57■□□□□ 0.72
CCDC78-206ENST00000463539 TRPC7Q9HCX4 862 aa19.57■□□□□ 0.72
CCDC78-206ENST00000463539 PAK5Q9P286 719 aa19.57■□□□□ 0.72
CCDC78-206ENST00000463539 RANBP2P49792 3224 aaKnown RBP19.57■□□□□ 0.72
CCDC78-206ENST00000463539 ZNF189O75820 626 aaPredicted RBP19.56■□□□□ 0.72
CCDC78-206ENST00000463539 GABRR2P28476 465 aa19.56■□□□□ 0.72
CCDC78-206ENST00000463539 AP1B1Q10567 949 aa19.56■□□□□ 0.72
CCDC78-206ENST00000463539 MORF4L2Q15014 288 aa19.56■□□□□ 0.72
CCDC78-206ENST00000463539 ARTNQ5T4W7 220 aa19.56■□□□□ 0.72
CCDC78-206ENST00000463539 RAP1GAP2Q684P5 730 aa19.56■□□□□ 0.72
CCDC78-206ENST00000463539 PDE12Q6L8Q7 609 aaKnown RBP19.56■□□□□ 0.72
CCDC78-206ENST00000463539 PCGF5Q86SE9 256 aa19.56■□□□□ 0.72
CCDC78-206ENST00000463539 TP53INP2Q8IXH6 220 aa19.56■□□□□ 0.72
CCDC78-206ENST00000463539 TSEN2Q8NCE0 465 aaKnown RBP19.56■□□□□ 0.72
CCDC78-206ENST00000463539 RNF38Q9H0F5 515 aa19.56■□□□□ 0.72
CCDC78-206ENST00000463539 MAN1C1Q9NR34 630 aa19.56■□□□□ 0.72
CCDC78-206ENST00000463539 HPCAL4Q9UM19 191 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms