RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 SPATA31D3P0C874 917 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 IL9P15248 144 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 UCHL3P15374 230 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 TCF3P15923 654 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 PFKLP17858 780 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 SLC9A1P19634 815 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 GLDCP23378 1020 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 ACAT1P24752 427 aaKnown RBP6.07□□□□□ -1.44
VPS36-202ENST00000462289 CYP2F1P24903 491 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 CDH5P33151 784 aaPredicted RBP6.07□□□□□ -1.44
VPS36-202ENST00000462289 COPB1P53618 953 aaKnown RBP6.07□□□□□ -1.44
VPS36-202ENST00000462289 LMNB2Q03252 620 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 PLD1Q13393 1074 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 NR1I3Q14994 352 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 SLC39A12Q504Y0 691 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 FIGNQ5HY92 759 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 LIN9Q5TKA1 542 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 KLHDC7AQ5VTJ3 777 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 TCERG1LQ5VWI1 586 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 LCLAT1Q6UWP7 414 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 GBP6Q6ZN66 633 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 C4orf50Q6ZRC1 276 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 CLEC20AQ6ZU45 233 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 SPATA31D4Q6ZUB0 917 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 BHLHA9Q7RTU4 235 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 DNAJB7Q7Z6W7 309 aaPredicted RBP6.07□□□□□ -1.44
VPS36-202ENST00000462289 AOPEPQ8N6M6 819 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 C12orf76Q8N812 135 aaPredicted RBP6.07□□□□□ -1.44
VPS36-202ENST00000462289 RNF141Q8WVD5 230 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 GATAD2BQ8WXI9 593 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 DDX1Q92499 740 aaKnown RBP6.07□□□□□ -1.44
VPS36-202ENST00000462289 RHOVQ96L33 236 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 RIPOR3Q96MK2 946 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 SMOQ99835 787 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 ZNF518BQ9C0D4 1074 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 EPB41L4BQ9H329 900 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 GPATCH2Q9NW75 528 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 COMMD8Q9NX08 183 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 GDE1Q9NZC3 331 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 ZMYM5Q9UJ78 669 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 FAM50BQ9Y247 325 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 CHD5Q8TDI0 1954 aa6.07□□□□□ -1.44
VPS36-202ENST00000462289 DOCK4Q8N1I0 1966 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 TICRRQ7Z2Z1 1910 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 KRTAP9-7A8MTY7 169 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 SMTNL1A8MU46 457 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 UPK3BL1B0FP48 263 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 UPK3BL2E5RIL1 263 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 BEST1O76090 585 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 RHOP08100 348 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 PDGFRBP09619 1106 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 ZGLP1P0C6A0 271 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 LAMP2P13473 410 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 FCARP24071 287 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 TUBP50607 506 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 HK2P52789 917 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 PSMC1P62191 440 aaKnown RBP6.06□□□□□ -1.44
VPS36-202ENST00000462289 YWHAEP62258 255 aaKnown RBP6.06□□□□□ -1.44
VPS36-202ENST00000462289 RPL10AP62906 217 aaKnown RBP6.06□□□□□ -1.44
VPS36-202ENST00000462289 APBA1Q02410 837 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 TWF1Q12792 350 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 CETN1Q12798 172 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 CNGA2Q16280 664 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 MDH1BQ5I0G3 518 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 PPM1LQ5SGD2 360 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 ATAT1Q5SQI0 421 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 RARS2Q5T160 578 aaKnown RBP6.06□□□□□ -1.44
VPS36-202ENST00000462289 PM20D1Q6GTS8 502 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 CES5AQ6NT32 575 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 SARM1Q6SZW1 724 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 TMC5Q6UXY8 1006 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 DNAJC14Q6Y2X3 702 aaPredicted RBP6.06□□□□□ -1.44
VPS36-202ENST00000462289 BNC2Q6ZN30 1099 aaPredicted RBP6.06□□□□□ -1.44
VPS36-202ENST00000462289 ACOT1Q86TX2 421 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 TTC30AQ86WT1 665 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 C12orf29Q8N999 325 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 ANKRD52Q8NB46 1076 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 FAM13CQ8NE31 585 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 PDZD8Q8NEN9 1154 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 OR6B3Q8NGW1 331 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 SLC35F5Q8WV83 523 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 KCTD13Q8WZ19 329 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 OVCA2Q8WZ82 227 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 TFAP2BQ92481 460 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 SMG7Q92540 1137 aaKnown RBP6.06□□□□□ -1.44
VPS36-202ENST00000462289 SMARCD1Q96GM5 515 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 TMEM176AQ96HP8 235 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 NAP1L5Q96NT1 182 aaPredicted RBP6.06□□□□□ -1.44
VPS36-202ENST00000462289 PGLYRP2Q96PD5 576 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 MYADMQ96S97 322 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 MMS19Q96T76 1030 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 CRACR2AQ9BSW2 395 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 DUSP16Q9BY84 665 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 EDEM3Q9BZQ6 932 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 SNX25Q9H3E2 840 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 CYP4F11Q9HBI6 524 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 ZNF334Q9HCZ1 680 aaPredicted RBP6.06□□□□□ -1.44
VPS36-202ENST00000462289 DMAP1Q9NPF5 467 aaPredicted RBP6.06□□□□□ -1.44
VPS36-202ENST00000462289 HCFC1R1Q9NWW0 138 aa6.06□□□□□ -1.44
VPS36-202ENST00000462289 DUSP13Q9UII6 198 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms