RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SYCP2LQ5T4T6 812 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 SYPL2Q5VXT5 272 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 MBLAC2Q68D91 279 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 NADSYN1Q6IA69 706 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 DPY19L2P1Q6NXN4 242 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 RFWD3Q6PCD5 774 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 GJB7Q6PEY0 223 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 KIAA1324Q6UXG2 1013 aaKnown RBP9.51□□□□□ -0.89
BRCA1-207ENST00000461798 SERPINA13PQ6UXR4 307 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 CHST9Q7L1S5 443 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 AHI1Q8N157 1196 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 DEFB119Q8N690 84 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 KDM1BQ8NB78 822 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 HJURPQ8NCD3 748 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-207ENST00000461798 OR2T3Q8NH03 318 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 SORCS1Q8WY21 1168 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 PRCCQ92733 491 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-207ENST00000461798 TTC17Q96AE7 1141 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 SIPA1Q96FS4 1042 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 CNTNAP3BQ96NU0 1288 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 CNTNAP3Q9BZ76 1288 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 PCED1AQ9H1Q7 454 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 LHX5Q9H2C1 402 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 FBRSQ9HAH7 460 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 SIX2Q9NPC8 291 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 ACP6Q9NPH0 428 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 CD93Q9NPY3 652 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 ST7Q9NRC1 585 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 ABCB8Q9NUT2 735 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 ASNSD1Q9NWL6 643 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 SUSD2Q9UGT4 822 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 SUN2Q9UH99 717 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 PCDHGC3Q9UN70 934 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 NUP205Q92621 2012 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 METTL12A8MUP2 240 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 KCNJ18B7U540 433 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 E5RJQ4 531 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 THAP12O43422 761 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 TBL1XO60907 577 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 NDUFS2O75306 463 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 ATP5BP06576 529 aaKnown RBP9.5□□□□□ -0.89
BRCA1-207ENST00000461798 EPHX1P07099 455 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 CD70P32970 193 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 SGSHP51688 502 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 ARID5AQ03989 594 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 PTK2Q05397 1052 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 GFPT1Q06210 699 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-207ENST00000461798 SEMA3BQ13214 749 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 PDCLQ13371 301 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 ARID5BQ14865 1188 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 MAN2A1Q16706 1144 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 MS4A13Q5J8X5 152 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 SH3PXD2AQ5TCZ1 1133 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 PIP4P1Q86T03 277 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 TAC4Q86UU9 113 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 FAM114A1Q8IWE2 563 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 WFDC5Q8TCV5 224 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 TOE1Q96GM8 510 aaKnown RBP9.5□□□□□ -0.89
BRCA1-207ENST00000461798 HSPA12BQ96MM6 686 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 SLC2A13Q96QE2 648 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 NUP58Q9BVL2 599 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 POPDC2Q9HBU9 364 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.5□□□□□ -0.89
BRCA1-207ENST00000461798 VPS9D1Q9Y2B5 631 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 EPG5Q9HCE0 2579 aa9.5□□□□□ -0.89
BRCA1-207ENST00000461798 KCNU1A8MYU2 1149 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 FOXN3O00409 490 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-207ENST00000461798 CAPN9O14815 690 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 GIPC1O14908 333 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 TRUB2O95900 331 aaKnown RBP9.49□□□□□ -0.89
BRCA1-207ENST00000461798 ASLP04424 464 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 CFIP05156 583 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 SYPP08247 313 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 SLC2A3P11169 496 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 HLA-EP13747 358 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 GNSP15586 552 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 POLR2EP19388 210 aaKnown RBP9.49□□□□□ -0.89
BRCA1-207ENST00000461798 CLCN1P35523 988 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 MTIF2P46199 727 aaKnown RBP9.49□□□□□ -0.89
BRCA1-207ENST00000461798 NOVA1P51513 510 aaKnown RBP9.49□□□□□ -0.89
BRCA1-207ENST00000461798 SNX16P57768 344 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 RPS14P62263 151 aaKnown RBP9.49□□□□□ -0.89
BRCA1-207ENST00000461798 RPS24P62847 133 aaKnown RBP9.49□□□□□ -0.89
BRCA1-207ENST00000461798 APBA1Q02410 837 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 MTA1Q13330 715 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 SLC14A1Q13336 389 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 TAF5Q15542 800 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 ARHGAP44Q17R89 818 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 VWA3BQ502W6 1294 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 DCAF6Q58WW2 860 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 ZC3H12AQ5D1E8 599 aaKnown RBP9.49□□□□□ -0.89
BRCA1-207ENST00000461798 EFHC1Q5JVL4 640 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 MIIPQ5JXC2 388 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 PSAPL1Q6NUJ1 521 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 CREBRFQ8IUR6 639 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 MFN1Q8IWA4 741 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 FAM71AQ8IYT1 594 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 C1orf216Q8TAB5 229 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 CYB5D2Q8WUJ1 264 aa9.49□□□□□ -0.89
BRCA1-207ENST00000461798 FAM149B1Q96BN6 582 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms