RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 CRELD2Q6UXH1 353 aaPredicted RBP8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 SLC41A1Q8IVJ1 513 aa8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 COLGALT2Q8IYK4 626 aa8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 THNSL1Q8IYQ7 743 aa8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 COLGALT1Q8NBJ5 622 aa8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 GDPD5Q8WTR4 605 aa8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 PGBD4Q96DM1 585 aa8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 RAX2Q96IS3 184 aa8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 TIGD1Q96MW7 591 aa8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 ZMAT2Q96NC0 199 aaKnown RBP8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 TRIM6Q9C030 488 aaPredicted RBP8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 KCTD10Q9H3F6 313 aa8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 ANKFY1Q9P2R3 1169 aa8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 CACNG4Q9UBN1 327 aa8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 TUBD1Q9UJT1 453 aa8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 GDAQ9Y2T3 454 aa8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 NUMBLQ9Y6R0 609 aa8.66□□□□□ -1.02
ECHDC1-212ENST00000461239 GOLGA6L4A6NEF3 574 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 NT5C1B-RDH14C9J2C7 533 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 H3BNC9 293 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 HNRNPDLO14979 420 aaKnown RBP8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 GRM6O15303 877 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 CLDN3O15551 220 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 ITGB1P05556 798 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 MYL1P05976 194 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 ADRB2P07550 413 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 GALTP07902 379 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 HARSP12081 509 aaKnown RBP8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 SCP2P22307 547 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 CTNNB1P35222 781 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 SLC11A1P49279 550 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 LIG4P49917 911 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 ADKP55263 362 aaKnown RBP8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 ADCY2Q08462 1091 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 TRIM25Q14258 630 aaKnown RBP8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 NOLC1Q14978 699 aaKnown RBP eCLIP8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 POSTNQ15063 836 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 MUM1Q2TAK8 710 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 GLB1LQ6UWU2 654 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 CD300LGQ6UXG3 332 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 LIPIQ6XZB0 460 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 ELOA2Q8IYF1 753 aaPredicted RBP8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 SLC39A11Q8N1S5 342 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 LRRC43Q8N309 656 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 SLC17A8Q8NDX2 589 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 SPPL3Q8TCT6 385 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 TSPEARQ8WU66 669 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 AUTS2Q8WXX7 1259 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 ALG3Q92685 438 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 HVCN1Q96D96 273 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 BICD1Q96G01 975 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 SNX27Q96L92 541 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 LRGUKQ96M69 825 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 PPP1R10Q96QC0 940 aaKnown RBP8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 SLC2A13Q96QE2 648 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 ACCSQ96QU6 501 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 PAAF1Q9BRP4 392 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 ADPGKQ9BRR6 497 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 CBWD1Q9BRT8 395 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 VN1R3Q9BXE9 311 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 ALG13Q9NP73 1137 aaKnown RBP8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 UBN1Q9NPG3 1134 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 CPSF3Q9UKF6 684 aaKnown RBP8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 PCDHA5Q9Y5H7 936 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 A0A0C4DFX4 3053 aa8.65□□□□□ -1.02
ECHDC1-212ENST00000461239 VCANP13611 3396 aa8.65□□□□□ -1.03
ECHDC1-212ENST00000461239 NLRC5Q86WI3 1866 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 MYO7AQ13402 2215 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 SMIM28A0A1B0GU29 152 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 TTC26A0AVF1 554 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 OGTO15294 1046 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 EIF3DO15371 548 aaKnown RBP eCLIP8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 NDUFS2O75306 463 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 RB1P06400 928 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 CXCL8P10145 99 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 MTHFD2P13995 350 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 ACOT2P49753 483 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 BCAR1P56945 870 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 PFKPQ01813 784 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 LRP8Q14114 963 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 GBX1Q14549 363 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 KCNB1Q14721 858 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 GLRA4Q5JXX5 417 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 LRSAM1Q6UWE0 723 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 IRF2BP1Q8IU81 584 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 NELFCDQ8IXH7 590 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 FAM26EQ8N5C1 309 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 GPT2Q8TD30 523 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 RABGGTAQ92696 567 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 P2RX5Q93086 422 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 SAMD11Q96NU1 681 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 TCHPQ9BT92 498 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 MSTO1Q9BUK6 570 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 MRPL9Q9BYD2 267 aaKnown RBP8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 MARCH5Q9NX47 278 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 MTCH2Q9Y6C9 303 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 COL4A4P53420 1690 aaPredicted RBP8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 RALGAPA2Q2PPJ7 1873 aa8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 PRRC2BQ5JSZ5 2229 aaKnown RBP8.64□□□□□ -1.03
ECHDC1-212ENST00000461239 ATG2AQ2TAZ0 1938 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms