RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 RILPL2Q969X0 211 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 SKA1Q96BD8 255 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 C3orf49Q96BT1 292 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 TRMT61AQ96FX7 289 aaKnown RBP3.78□□□□□ -1.8
VPS8-215ENST00000460158 REXO5Q96IC2 774 aaKnown RBP3.78□□□□□ -1.8
VPS8-215ENST00000460158 FAR2Q96K12 515 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 TRAPPC9Q96Q05 1148 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 FYTTD1Q96QD9 318 aaKnown RBP3.78□□□□□ -1.8
VPS8-215ENST00000460158 TSPAN18Q96SJ8 248 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 FAM167BQ9BTA0 163 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 ISCA1Q9BUE6 129 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 ADGRE3Q9BY15 652 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 TAF1DQ9H5J8 278 aaPredicted RBP3.78□□□□□ -1.8
VPS8-215ENST00000460158 PTGFRNQ9P2B2 879 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 TRPC5Q9UL62 973 aaPredicted RBP3.78□□□□□ -1.8
VPS8-215ENST00000460158 ISY1Q9ULR0 285 aaKnown RBP3.78□□□□□ -1.8
VPS8-215ENST00000460158 NFU1Q9UMS0 254 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 GPR52Q9Y2T5 361 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 MANSC4A6NHS7 340 aaPredicted RBP3.77□□□□□ -1.81
VPS8-215ENST00000460158 C16orf96A6NNT2 1141 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 EFCAB8A8MWE9 144 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 H0Y3Z8 333 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 UBE2Q2LH0YL09 131 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 NKX2-8O15522 239 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 FAM155BO75949 473 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 KAT7O95251 611 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 LARGE1O95461 756 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 MATN1P21941 496 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 AGTR2P50052 363 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 RNASELQ05823 741 aaKnown RBP3.77□□□□□ -1.81
VPS8-215ENST00000460158 CUL4BQ13620 913 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 PDE1CQ14123 709 aaPredicted RBP3.77□□□□□ -1.81
VPS8-215ENST00000460158 RPS6KA2Q15349 733 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 CNGA3Q16281 694 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 ALDH1L2Q3SY69 923 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 CCDC92Q53HC0 331 aaPredicted RBP3.77□□□□□ -1.81
VPS8-215ENST00000460158 TMEM63BQ5T3F8 832 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 RANBP10Q6VN20 620 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 ZNF788Q6ZQV5 615 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 MOGAT3Q86VF5 341 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 ZSCAN30Q86W11 494 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 CSGALNACT1Q8TDX6 532 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 ZNF622Q969S3 477 aaKnown RBP eCLIP3.77□□□□□ -1.814e-8■□□□□ 8.1
VPS8-215ENST00000460158 NAF1Q96HR8 494 aaKnown RBP3.77□□□□□ -1.81
VPS8-215ENST00000460158 HIC2Q96JB3 615 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 MPP4Q96JB8 637 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 TTC14Q96N46 770 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 ASB2Q96Q27 587 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 SEPSECSQ9HD40 501 aaKnown RBP3.77□□□□□ -1.81
VPS8-215ENST00000460158 SAYSD1Q9NPB0 183 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 LIN7CQ9NUP9 197 aaKnown RBP3.77□□□□□ -1.81
VPS8-215ENST00000460158 C9orf78Q9NZ63 289 aaPredicted RBP3.77□□□□□ -1.81
VPS8-215ENST00000460158 CLIC5Q9NZA1 410 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 KCND3Q9UK17 655 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 C19orf53Q9UNZ5 99 aaPredicted RBP3.77□□□□□ -1.81
VPS8-215ENST00000460158 SLC12A4Q9UP95 1085 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 HEMK1Q9Y5R4 338 aaPredicted RBP3.77□□□□□ -1.81
VPS8-215ENST00000460158 COX11Q9Y6N1 276 aa3.77□□□□□ -1.81
VPS8-215ENST00000460158 SPATA31A1Q5TZJ5 1347 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 B9A039 149 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 PRYO14603 147 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 KRT38O76015 456 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 CYP21A2P08686 494 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 CHRM5P08912 532 aaPredicted RBP3.76□□□□□ -1.81
VPS8-215ENST00000460158 CYP2A6P11509 494 aaPredicted RBP3.76□□□□□ -1.81
VPS8-215ENST00000460158 SFPQP23246 707 aaKnown RBP eCLIP3.76□□□□□ -1.81
VPS8-215ENST00000460158 NDUFS1P28331 727 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 SERPINA4P29622 427 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 ADD2P35612 726 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 DDIT3P35638 169 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 STAT6P42226 847 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 VPS41P49754 854 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 CDK7P50613 346 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 ARL4CP56559 192 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 FOXL2P58012 376 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 TUBA4AP68366 448 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 RBM6P78332 1123 aaKnown RBP3.76□□□□□ -1.81
VPS8-215ENST00000460158 KPNB1Q14974 876 aaKnown RBP3.76□□□□□ -1.81
VPS8-215ENST00000460158 TOMM20Q15388 145 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 CDC37Q16543 378 aaPredicted RBP3.76□□□□□ -1.81
VPS8-215ENST00000460158 CERKLQ49MI3 558 aaPredicted RBP3.76□□□□□ -1.81
VPS8-215ENST00000460158 HYIQ5T013 277 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 CC2D1BQ5T0F9 858 aaKnown RBP3.76□□□□□ -1.81
VPS8-215ENST00000460158 SYCE2Q6PIF2 218 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 VSTM1Q6UX27 236 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 ZNF782Q6ZMW2 699 aaPredicted RBP3.76□□□□□ -1.81
VPS8-215ENST00000460158 LAS2Q8IYD9 372 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 SEMA6DQ8NFY4 1073 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 OR6Y1Q8NGX8 325 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 CPT1BQ92523 772 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 ABHD16BQ9H3Z7 469 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 ASNSD1Q9NWL6 643 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 KIF17Q9P2E2 1029 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 B3GNT3Q9Y2A9 372 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 DGKBQ9Y6T7 804 aa3.76□□□□□ -1.81
VPS8-215ENST00000460158 TBC1D3DA0A087WVF3 549 aa3.75□□□□□ -1.81
VPS8-215ENST00000460158 TBC1D3IA0A087WXS9 549 aa3.75□□□□□ -1.81
VPS8-215ENST00000460158 TBC1D3EA0A087X179 549 aa3.75□□□□□ -1.81
VPS8-215ENST00000460158 TBC1D3KA0A087X1G2 549 aa3.75□□□□□ -1.81
VPS8-215ENST00000460158 TBC1D3BA6NDS4 549 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms