RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 MPP5Q8N3R9 675 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 ATPAF2Q8N5M1 289 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 TEKT4Q8WW24 435 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 SLCO2A1Q92959 643 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 HHIPL1Q96JK4 782 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 TMEM161AQ9NX61 479 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 CFAP69A5D8W1 941 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 ARHGAP42A6NI28 874 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 EOMESO95936 686 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 F9P00740 461 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 YWHAQP27348 245 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 HOXC8P31273 242 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 MAXP61244 160 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 USP46P62068 366 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 DSC3Q14574 896 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 RAP1GAP2Q684P5 730 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 OR52K1Q8NGK4 314 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 PAWRQ96IZ0 340 aaKnown RBP9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 FTHL17Q9BXU8 183 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 CNOT10Q9H9A5 744 aaKnown RBP9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 USP29Q9HBJ7 922 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 MTMR10Q9NXD2 777 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 PSD3Q9NYI0 1048 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 EFR3BQ9Y2G0 817 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 TRIM49D1C9J1S8 452 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 DPYSL4O14531 572 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 CLGNO14967 610 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 ALOX15BO15296 676 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 QPCTQ16769 361 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 RTP2Q5QGT7 225 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 OTOP3Q7RTS5 596 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 NUP93Q8N1F7 819 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 CHMP6Q96FZ7 201 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 PGM2Q96G03 612 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 TGS1Q96RS0 853 aaKnown RBP9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 ROPN1BQ9BZX4 212 aaPredicted RBP9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 ROPN1Q9HAT0 212 aaPredicted RBP9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 SLC12A6Q9UHW9 1150 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 RPS6KL1Q9Y6S9 549 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 TCRBV9S1A1TA0A576 114 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 TTC24A2A3L6 582 aaPredicted RBP9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 TSPAN3O60637 253 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 UGT1A9O60656 530 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 VAV1P15498 845 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 TBX4P57082 545 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 GEMIN4P57678 1058 aaKnown RBP9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 FAAP100Q0VG06 881 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 MAP3K21Q5TCX8 1036 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 TRMT10BQ6PF06 316 aaKnown RBP9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 PRPF39Q86UA1 669 aaKnown RBP9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 NAT8LQ8N9F0 302 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 ZNF669Q96BR6 464 aaPredicted RBP9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 YME1L1Q96TA2 773 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 MYCBPQ99417 103 aaPredicted RBP9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 TXLNGYQ9BZA5 131 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 UGT1A7Q9HAW7 530 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 UGT1A10Q9HAW8 530 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 UGT1A8Q9HAW9 530 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 MARCH2Q9P0N8 246 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 PSMC3IPQ9P2W1 217 aaPredicted RBP9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 FBXW11Q9UKB1 542 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 SF3B1O75533 1304 aaKnown RBP eCLIP9.62□□□□□ -0.878e-7■■■■■ 194
NUDCD3-203ENST00000460110 CST5P28325 142 aaPredicted RBP9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 SERPINB6P35237 376 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 IKBKEQ14164 716 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 TRIM71Q2Q1W2 868 aaKnown RBP9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 FAM133BQ5BKY9 247 aaKnown RBP9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 ICE2Q659A1 982 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 DRICH1Q6PGQ1 229 aaPredicted RBP9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 ARHGAP36Q6ZRI8 547 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 RNF135Q8IUD6 432 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 SPATA22Q8NHS9 363 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 LRRC8CQ8TDW0 803 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 PDCD6IPQ8WUM4 868 aaKnown RBP9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 SPOCK2Q92563 424 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 KLHL5Q96PQ7 755 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 UNKQ9C0B0 810 aaKnown RBP9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 SMYD2Q9NRG4 433 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 ABCC13Q9NSE7 274 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 DCTN4Q9UJW0 460 aa9.62□□□□□ -0.87
NUDCD3-203ENST00000460110 ZBTB24O43167 697 aaPredicted RBP9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 NFKB1P19838 968 aa9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 GPX6P59796 221 aa9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 RFWD3Q6PCD5 774 aa9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 RNF19BQ6ZMZ0 732 aa9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 LRRC6Q86X45 466 aa9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 COLGALT2Q8IYK4 626 aa9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 ANKS4BQ8N8V4 417 aa9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 STAMBPL1Q96FJ0 436 aa9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 FSD1LQ9BXM9 530 aa9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 NSRP1Q9H0G5 558 aaKnown RBP9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 PCMTD2Q9NV79 361 aa9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 PCDHB8Q9UN66 801 aa9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 RRP15Q9Y3B9 282 aaKnown RBP9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 ZSWIM8A7E2V4 1837 aa9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 A0A0A0MRY4 1105 aa9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 ADAM12O43184 909 aa9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 ERVK-10P10266 1014 aa9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 PYGBP11216 843 aa9.61□□□□□ -0.87
NUDCD3-203ENST00000460110 NR2C2P49116 596 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms