RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 DCDC2Q9UHG0 476 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 ZNF214Q9UL59 606 aaPredicted RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 TMCO1Q9UM00 188 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 SCN1AP35498 2009 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 CREB3O43889 395 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 PRPSAP2O60256 369 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 CILPO75339 1184 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 LYPLA1O75608 230 aaPredicted RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 ZNF189O75820 626 aaPredicted RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 RAD17O75943 681 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 TOP3BO95985 862 aaKnown RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 PROCP04070 461 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 ALDOAP04075 364 aaKnown RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 PRKCGP05129 697 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 SMIM18P0DKX4 95 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 CHRNA5P30532 468 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 RAP1GAPP47736 663 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 HARS2P49590 506 aaKnown RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 BCAR1P56945 870 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 SNAPC2Q13487 334 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 NAB1Q13506 487 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 SEMA5AQ13591 1074 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 MTMR2Q13614 643 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 PDE1CQ14123 709 aaPredicted RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 BTG3Q14201 252 aaPredicted RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 KRT81Q14533 505 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 PDK3Q15120 406 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 MMEL1Q495T6 779 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 RAB6CQ53S08 254 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 ZNF667Q5HYK9 610 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 N4BP2L1Q5TBK1 243 aaPredicted RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 FAXCQ5TGI0 409 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 SNRNP48Q6IEG0 339 aaKnown RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 TMEM126BQ8IUX1 230 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 CDKL3Q8IVW4 592 aaPredicted RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 MPP5Q8N3R9 675 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 FBXW8Q8N3Y1 598 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 POU5F2Q8N7G0 328 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 PCDH19Q8TAB3 1148 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 PPP1R14CQ8TAE6 165 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 DEPDC1BQ8WUY9 529 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 PRPF31Q8WWY3 499 aaKnown RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 RXFP2Q8WXD0 754 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 TEPSINQ96N21 525 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 TWNKQ96RR1 684 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 TBCBQ99426 244 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 PCYT2Q99447 389 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 ZNF670Q9BS34 389 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 TCHPQ9BT92 498 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 ELOVL4Q9GZR5 314 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 ZCWPW1Q9H0M4 648 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 RAB6CQ9H0N0 254 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 SMYD3Q9H7B4 428 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 VRTNQ9H8Y1 702 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 PCDH18Q9HCL0 1135 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 PTPRHQ9HD43 1115 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 NXF1Q9UBU9 619 aaKnown RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 SIX4Q9UIU6 781 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 BTBD19C9JJ37 291 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 MDM4O15151 490 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 OPHN1O60890 802 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 METTL18O95568 372 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 PRKCBP05771 671 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 MLNP12872 115 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 CCDC130P13994 396 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 VAV1P15498 845 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 RAG1P15918 1043 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 PDGFRAP16234 1089 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 RGS2P41220 211 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 NUMBP49757 651 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 PSMD7P51665 324 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 EPHB1P54762 984 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 CDH8P55286 799 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 HDAC4P56524 1084 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 RPL10AP62906 217 aaKnown RBP8.73□□□□□ -1.01
VPS50-208ENST00000458707 C15orf59Q2T9L4 293 aaPredicted RBP8.73□□□□□ -1.01
VPS50-208ENST00000458707 IER5Q5VY09 327 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 PDPK2PQ6A1A2 396 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 FBXL19Q6PCT2 694 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 ATG14Q6ZNE5 492 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 SPATA24Q86W54 205 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 ALDH16A1Q8IZ83 802 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 AGBL3Q8NEM8 1001 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 PPP4R1Q8TF05 950 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 TFB1MQ8WVM0 346 aaKnown RBP8.73□□□□□ -1.01
VPS50-208ENST00000458707 DGCR14Q96DF8 476 aaKnown RBP8.73□□□□□ -1.01
VPS50-208ENST00000458707 TMEM176AQ96HP8 235 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 PRICKLE1Q96MT3 831 aaPredicted RBP8.73□□□□□ -1.01
VPS50-208ENST00000458707 KCNK16Q96T55 309 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 MMP19Q99542 508 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 TRIM56Q9BRZ2 755 aaKnown RBP8.73□□□□□ -1.01
VPS50-208ENST00000458707 NRBP2Q9NSY0 501 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 PLK2Q9NYY3 685 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 PTTG2Q9NZH5 202 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 C6orf203Q9P0P8 240 aaPredicted RBP8.73□□□□□ -1.01
VPS50-208ENST00000458707 TUBGCP4Q9UGJ1 667 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 PSMD13Q9UNM6 376 aa8.73□□□□□ -1.01
VPS50-208ENST00000458707 C15orf38-AP3S2A0A0A6YYH1 394 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 M0QYV0 167 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 WNT10BO00744 389 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms