RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 TM4SF4P48230 202 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 BASP1P80723 227 aaKnown RBP12.15□□□□□ -0.46
SYNE2-207ENST00000458046 TARBP2Q15633 366 aaKnown RBP12.15□□□□□ -0.46
SYNE2-207ENST00000458046 FER1L6Q2WGJ9 1857 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 WDR81Q562E7 1941 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 ZPBP2Q6X784 338 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 MTDHQ86UE4 582 aaKnown RBP12.15□□□□□ -0.46
SYNE2-207ENST00000458046 LONP2Q86WA8 852 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 RFX6Q8HWS3 928 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 KCTD6Q8NC69 237 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 ALKBH8Q96BT7 664 aaKnown RBP12.15□□□□□ -0.46
SYNE2-207ENST00000458046 MIEF2Q96C03 454 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 ACO2Q99798 780 aaKnown RBP12.15□□□□□ -0.46
SYNE2-207ENST00000458046 CALN1Q9BXU9 219 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 ZNF518BQ9C0D4 1074 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.15□□□□□ -0.46
SYNE2-207ENST00000458046 RIMKLBQ9ULI2 386 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 NUMBLQ9Y6R0 609 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 PIK3R2O00459 728 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 SNX4O95219 450 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 ASGR2P07307 311 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 ATP2A2P16615 1042 aaKnown RBP12.15□□□□□ -0.46
SYNE2-207ENST00000458046 EPHB2P29323 1055 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 PHBP35232 272 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 PTPN7P35236 360 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 GJA5P36382 358 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 TCF7P36402 384 aaPredicted RBP12.15□□□□□ -0.46
SYNE2-207ENST00000458046 SLC18A1P54219 525 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 IL1RL1Q01638 556 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 TAP1Q03518 808 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 ANKDD1AQ495B1 522 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 DCAF15Q66K64 600 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 ALG1LQ6GMV1 187 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 RGS9BPQ6ZS82 235 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 TRIM50Q86XT4 487 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 NIPA2Q8N8Q9 360 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 ATP11CQ8NB49 1132 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 RFWD2Q8NHY2 731 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 SLC7A6OSQ96CW6 309 aaPredicted RBP12.15□□□□□ -0.46
SYNE2-207ENST00000458046 CNDP2Q96KP4 475 aaKnown RBP12.15□□□□□ -0.46
SYNE2-207ENST00000458046 CPXM1Q96SM3 734 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 TBC1D10AQ9BXI6 508 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 LRMDAQ9H2I8 198 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 SMOC1Q9H4F8 434 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 ZC3H7BQ9UGR2 993 aaKnown RBP12.15□□□□□ -0.46
SYNE2-207ENST00000458046 CHMP2BQ9UQN3 213 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 ARID2Q68CP9 1835 aa12.15□□□□□ -0.46
SYNE2-207ENST00000458046 SIGLEC16A6NMB1 481 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 LACTBL1A8MY62 500 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 OGTO15294 1046 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 MAFO75444 373 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-207ENST00000458046 MICAL2O94851 1124 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 FARP2O94887 1054 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-207ENST00000458046 PRKCBP05771 671 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 AP3M2P53677 418 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 LAMTOR4Q0VGL1 99 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 HADHQ16836 314 aaKnown RBP12.14□□□□□ -0.47
SYNE2-207ENST00000458046 LY6KQ17RY6 165 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 PLA2G4EQ3MJ16 856 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 NPNTQ6UXI9 565 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 NLRP9Q7RTR0 991 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 GPR155Q7Z3F1 870 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 SLC9B2Q86UD5 537 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 HEATR4Q86WZ0 1026 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 IGDCC3Q8IVU1 814 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 CNTD1Q8N815 330 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 XYLT2Q9H1B5 865 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 GPR34Q9UPC5 381 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 PCDHB9Q9Y5E1 797 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 MYH9P35579 1960 aaKnown RBP12.14□□□□□ -0.47
SYNE2-207ENST00000458046 IGKV6D-21A0A0A0MT36 114 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 EIF4E1BA6NMX2 242 aaKnown RBP12.14□□□□□ -0.47
SYNE2-207ENST00000458046 CASQ2O14958 399 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-207ENST00000458046 B4GALT5O43286 388 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 ATP5HO75947 161 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 KRT7P08729 469 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 HOXC6P09630 235 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 CD9P21926 228 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 ICAM3P32942 547 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 EIF3EP60228 445 aaKnown RBP12.14□□□□□ -0.47
SYNE2-207ENST00000458046 YWHAEP62258 255 aaKnown RBP12.14□□□□□ -0.47
SYNE2-207ENST00000458046 MMRN1Q13201 1228 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 ADGRD1Q6QNK2 874 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 CCDC149Q6ZUS6 474 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 BBS12Q6ZW61 710 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 ZC3H18Q86VM9 953 aaKnown RBP12.14□□□□□ -0.47
SYNE2-207ENST00000458046 TMEM192Q8IY95 271 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 FAM13CQ8NE31 585 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 PTPRN2Q92932 1015 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 SGCZQ96LD1 299 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 ZFP69BQ9UJL9 534 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 CPSF3Q9UKF6 684 aaKnown RBP12.14□□□□□ -0.47
SYNE2-207ENST00000458046 GJD2Q9UKL4 321 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 A0A0G2JND7 137 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 TBKBP1A7MCY6 615 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 AVILO75366 819 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 ZWINTO95229 277 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 ERBB2P04626 1255 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 PF4V1P10720 104 aa12.14□□□□□ -0.47
SYNE2-207ENST00000458046 GM2AP17900 193 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms