RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 UBXN2BQ14CS0 331 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 ANO4Q32M45 955 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 BRMS1LQ5PSV4 323 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 C6orf132Q5T0Z8 1188 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 ARTNQ5T4W7 220 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 RNF43Q68DV7 783 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 FSTL4Q6MZW2 842 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 RFWD3Q6PCD5 774 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 DCUN1D2Q6PH85 259 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 STRADAQ7RTN6 431 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 PHTF2Q8N3S3 785 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 NAT16Q8N8M0 369 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 ATP6V0D2Q8N8Y2 350 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 SPC24Q8NBT2 197 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 PJA1Q8NG27 643 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 EZH1Q92800 747 aaPredicted RBP10.42□□□□□ -0.74
ATG4A-206ENST00000457035 CD101Q93033 1021 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 RNF34Q969K3 372 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 ZNF653Q96CK0 615 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 TMA16Q96EY4 203 aaKnown RBP10.42□□□□□ -0.74
ATG4A-206ENST00000457035 MYEOVQ96EZ4 313 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 TRIM11Q96F44 468 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 MCEEQ96PE7 176 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 PRMT1Q99873 361 aaKnown RBP10.42□□□□□ -0.74
ATG4A-206ENST00000457035 P2RY13Q9BPV8 354 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 CNPY3Q9BT09 278 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 BBS2Q9BXC9 721 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 PACSIN1Q9BY11 444 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 IRX2Q9BZI1 471 aaPredicted RBP10.42□□□□□ -0.74
ATG4A-206ENST00000457035 TRIM7Q9C029 511 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 TKTL2Q9H0I9 626 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 DEF6Q9H4E7 631 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 GRPEL1Q9HAV7 217 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 SPTLC3Q9NUV7 552 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 PLK2Q9NYY3 685 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 DLGAP2Q9P1A6 1054 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 SLC12A6Q9UHW9 1150 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 CLEC4EQ9ULY5 219 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 CHD5Q8TDI0 1954 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 GOLGA6L3A6NEY3 463 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 BHMG1C9JSJ3 638 aaPredicted RBP10.41□□□□□ -0.74
ATG4A-206ENST00000457035 TRIM24O15164 1050 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 CCP110O43303 1012 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 CACNG3O60359 315 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 TSPAN3O60637 253 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 TULP3O75386 442 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 PAGE1O75459 146 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 LCA5LO95447 670 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 MOCS2O96007 188 aaPredicted RBP10.41□□□□□ -0.74
ATG4A-206ENST00000457035 RDXP35241 583 aaKnown RBP10.41□□□□□ -0.74
ATG4A-206ENST00000457035 SGSHP51688 502 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 ZNF252P-AS1Q0IIN9 211 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 CDO1Q16878 200 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 MPPE1Q53F39 396 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 MS4A13Q5J8X5 152 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 MPP7Q5T2T1 576 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 SND1Q7KZF4 910 aaKnown RBP eCLIP10.41□□□□□ -0.74
ATG4A-206ENST00000457035 CCDC105Q8IYK2 499 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 CCDC170Q8IYT3 715 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 ARFGAP1Q8N6T3 406 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 TMEM105Q8N8V8 129 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 FNIP1Q8TF40 1166 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 DDI1Q8WTU0 396 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 FAM172AQ8WUF8 416 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 BHMTQ93088 406 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 ARHGEF26Q96DR7 871 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 C1orf74Q96LT6 269 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 DDX50Q9BQ39 737 aaKnown RBP10.41□□□□□ -0.74
ATG4A-206ENST00000457035 LMAN1LQ9HAT1 526 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 MRPL47Q9HD33 250 aaKnown RBP10.41□□□□□ -0.74
ATG4A-206ENST00000457035 TMPRSS4Q9NRS4 437 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 MYO1AQ9UBC5 1043 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 NDRG2Q9UN36 371 aaKnown RBP10.41□□□□□ -0.74
ATG4A-206ENST00000457035 HS3ST4Q9Y661 456 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 SCINQ9Y6U3 715 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 SDK1Q7Z5N4 2213 aa10.41□□□□□ -0.74
ATG4A-206ENST00000457035 GON4LQ3T8J9 2241 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 ANTXRLA6NF34 631 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 K7EQS6 105 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 NCAM2O15394 837 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 EGFP01133 1207 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 CYBBP04839 570 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 DCNP07585 359 aaKnown RBP10.4□□□□□ -0.74
ATG4A-206ENST00000457035 H2AFZP0C0S5 128 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 TACR2P21452 398 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 DRD1P21728 446 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 HOXD9P28356 352 aaPredicted RBP10.4□□□□□ -0.74
ATG4A-206ENST00000457035 ADRA1BP35368 520 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 RPS9P46781 194 aaKnown RBP10.4□□□□□ -0.74
ATG4A-206ENST00000457035 RPS24P62847 133 aaKnown RBP10.4□□□□□ -0.74
ATG4A-206ENST00000457035 GRSF1Q12849 480 aaKnown RBP eCLIP10.4□□□□□ -0.74
ATG4A-206ENST00000457035 MTA1Q13330 715 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 AUHQ13825 339 aaKnown RBP10.4□□□□□ -0.74
ATG4A-206ENST00000457035 C5orf22Q49AR2 442 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 DGKKQ5KSL6 1271 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 RAP1GAP2Q684P5 730 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 FBXL22Q6P050 247 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 H2AFVQ71UI9 128 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 C14orf80Q86SX3 495 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 FAM131BQ86XD5 332 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms