RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ITM2AO43736 263 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 CHRNA1P02708 482 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 ELNP15502 786 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 RAB27AP51159 221 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 SLC25A3Q00325 362 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 RALGPS1Q5JS13 557 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 SLC30A9Q6PML9 568 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 LRRC52Q8N7C0 313 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 RNF169Q8NCN4 708 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 GSTCDQ8NEC7 633 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 AGO3Q9H9G7 860 aaKnown RBP12.8□□□□□ -0.36
LINC00959-201ENST00000456581 ASNSD1Q9NWL6 643 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 HESX1Q9UBX0 185 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 LIN7AO14910 233 aaPredicted RBP12.79□□□□□ -0.36
LINC00959-201ENST00000456581 METTL18O95568 372 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 KCNA4P22459 653 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 IL4RP24394 825 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 PITX1P78337 314 aaPredicted RBP12.79□□□□□ -0.36
LINC00959-201ENST00000456581 SARNPP82979 210 aaKnown RBP12.79□□□□□ -0.36
LINC00959-201ENST00000456581 NOMO1Q15155 1222 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 PAN2Q504Q3 1202 aaKnown RBP12.79□□□□□ -0.36
LINC00959-201ENST00000456581 VWA5B1Q5TIE3 1220 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 BSPRYQ5W0U4 402 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 WSCD1Q658N2 575 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 UNC5AQ6ZN44 842 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 RSPH3Q86UC2 560 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 NDUFAF2Q8N183 169 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 PLD5Q8N7P1 536 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 CFAP61Q8NHU2 1237 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 PYDC1Q8WXC3 89 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 SLC4A5Q9BY07 1137 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 TMPRSS4Q9NRS4 437 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 DERAQ9Y315 318 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 PLLPQ9Y342 182 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 PDCD11Q14690 1871 aaKnown RBP12.79□□□□□ -0.36
LINC00959-201ENST00000456581 RALGAPA2Q2PPJ7 1873 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 TTC3P53804 2025 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.79□□□□□ -0.36
LINC00959-201ENST00000456581 CAPN14A8MX76 684 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 E7ENQ6 273 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 I3L4J1 428 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 PDE5AO76074 875 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 TOMM70O94826 608 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 SLC6A3Q01959 620 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 PRKCZQ05513 592 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 OLIG2Q13516 323 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 TAZQ16635 292 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 KIAA0319Q5VV43 1072 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 RAPH1Q70E73 1250 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 TMEM110Q86TL2 294 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 SLC26A11Q86WA9 606 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 PQLC3Q8N755 202 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 APPL2Q8NEU8 664 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.79□□□□□ -0.36
LINC00959-201ENST00000456581 E2F7Q96AV8 911 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 CCDC124Q96CT7 223 aaKnown RBP12.79□□□□□ -0.36
LINC00959-201ENST00000456581 PHACTR1Q9C0D0 580 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 SLC7A8Q9UHI5 535 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 PCDHGB4Q9UN71 923 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 PCDHGB5Q9Y5G0 923 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 ZNF638Q14966 1978 aaKnown RBP12.79□□□□□ -0.36
LINC00959-201ENST00000456581 SCN10AQ9Y5Y9 1956 aa12.79□□□□□ -0.36
LINC00959-201ENST00000456581 SYNJ2BP-COX16A0A087WUM0 186 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 PRPSAP2O60256 369 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 DUSP11O75319 330 aaKnown RBP12.78□□□□□ -0.36
LINC00959-201ENST00000456581 NDUFV1P49821 464 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 TAF6P49848 677 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 PGGT1BP53609 377 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 HDAC4P56524 1084 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 RPL10AP62906 217 aaKnown RBP12.78□□□□□ -0.36
LINC00959-201ENST00000456581 MRPS35P82673 323 aaKnown RBP12.78□□□□□ -0.36
LINC00959-201ENST00000456581 CDC42EP1Q00587 391 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 KRT81Q14533 505 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 LPCAT4Q643R3 524 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 IZUMO2Q6UXV1 221 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 CHSY1Q86X52 802 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 NUDCD3Q8IVD9 361 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 ULK2Q8IYT8 1036 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 ADGRF2Q8IZF7 708 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 TTC13Q8NBP0 860 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 C3orf58Q8NDZ4 430 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 ZNF398Q8TD17 642 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 SOCS4Q8WXH5 440 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 ZNF778Q96MU6 729 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 SNX25Q9H3E2 840 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 COX16Q9P0S2 106 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 KIAA1257Q9ULG3 409 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 RNASEH1O60930 286 aaKnown RBP12.78□□□□□ -0.36
LINC00959-201ENST00000456581 DNAJC6O75061 913 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 FESP07332 822 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 CYBAP13498 195 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 CCND3P30281 292 aaPredicted RBP12.78□□□□□ -0.36
LINC00959-201ENST00000456581 HOXC8P31273 242 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 MRPS6P82932 125 aaKnown RBP12.78□□□□□ -0.36
LINC00959-201ENST00000456581 GBE1Q04446 702 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 EML3Q32P44 896 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 TEX44Q53QW1 395 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 TTC39BQ5VTQ0 682 aaPredicted RBP12.78□□□□□ -0.36
LINC00959-201ENST00000456581 CES3Q6UWW8 571 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 PCDH19Q8TAB3 1148 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms