RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 ETFBKMTQ8IXQ9 262 aa14.78□□□□□ -0.04
HMGXB4-204ENST00000455359 CCDC185Q8N715 623 aa14.78□□□□□ -0.04
HMGXB4-204ENST00000455359 NELL2Q99435 816 aa14.78□□□□□ -0.04
HMGXB4-204ENST00000455359 EPAS1Q99814 870 aa14.78□□□□□ -0.04
HMGXB4-204ENST00000455359 RAB6CQ9H0N0 254 aa14.78□□□□□ -0.04
HMGXB4-204ENST00000455359 KCNF1Q9H3M0 494 aa14.78□□□□□ -0.04
HMGXB4-204ENST00000455359 HEBP1Q9NRV9 189 aa14.78□□□□□ -0.04
HMGXB4-204ENST00000455359 DONSONQ9NYP3 566 aa14.78□□□□□ -0.04
HMGXB4-204ENST00000455359 PCSK1NQ9UHG2 260 aa14.78□□□□□ -0.04
HMGXB4-204ENST00000455359 FBXO10Q9UK96 956 aa14.78□□□□□ -0.04
HMGXB4-204ENST00000455359 F5P12259 2224 aa14.78□□□□□ -0.04
HMGXB4-204ENST00000455359 CUL9Q8IWT3 2517 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 GOLGA6L7A0A1B0GV03 622 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 NEDD8-MDP1E9PL57 170 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 TRDMT1O14717 391 aaKnown RBP14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 CLDN11O75508 207 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 HCAR3P49019 387 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 NAP1L1P55209 391 aaKnown RBP14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 STARD6P59095 220 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 SLC25A11Q02978 314 aaKnown RBP14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 GAB4Q2WGN9 574 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 MANEALQ5VSG8 457 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 RFWD3Q6PCD5 774 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 ZNF683Q8IZ20 524 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 SYCE1Q8N0S2 351 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 LGI2Q8N0V4 545 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 CCDC26Q8TAB7 109 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 RPRD1AQ96P16 312 aaPredicted RBP14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 SIK2Q9H0K1 926 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 RCOR3Q9P2K3 495 aaPredicted RBP14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 TFR2Q9UP52 801 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 AP4E1Q9UPM8 1137 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 SLC27A6Q9Y2P4 619 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 PPP2R2CQ9Y2T4 447 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 ALG6Q9Y672 507 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 DUSP10Q9Y6W6 482 aa14.77□□□□□ -0.04
HMGXB4-204ENST00000455359 A0A0A0MRY4 1105 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 A0A1B0GVM2 712 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 TCAF2A6NFQ2 919 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 E9PAM4 449 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 TNFRSF10AO00220 468 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 SPOPO43791 374 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 TBL1XO60907 577 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 HOXD9P28356 352 aaPredicted RBP14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 HOXC13P31276 330 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 SSR1P43307 286 aaKnown RBP14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 VCPP55072 806 aaKnown RBP14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 CDH4P55283 916 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 SEMA3BQ13214 749 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 DPYSL2Q16555 572 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 TRIM67Q6ZTA4 783 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 TPRG1Q6ZUI0 275 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 CYP4V2Q6ZWL3 525 aaPredicted RBP14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 VSIG1Q86XK7 387 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 MAP7D3Q8IWC1 876 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 RHOT1Q8IXI2 618 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 FIBINQ8TAL6 211 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 KIAA1524Q8TCG1 905 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 TBC1D31Q96DN5 1066 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 PRICKLE1Q96MT3 831 aaPredicted RBP14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 PEBP4Q96S96 227 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 P2RY13Q9BPV8 354 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 SNRNP25Q9BV90 132 aaKnown RBP14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 OSBPL6Q9BZF3 934 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 DEC1Q9P2X7 70 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 SALL4Q9UJQ4 1053 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 VANGL2Q9ULK5 521 aa14.76□□□□□ -0.05
HMGXB4-204ENST00000455359 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 MACROD2A1Z1Q3 448 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 GOLGA6L9A6NEM1 432 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 TMEM110-MUSTN1A8MSY1 372 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 FGF10O15520 208 aaPredicted RBP14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 PSTPIP1O43586 416 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 TSPAN3O60637 253 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 TULP3O75386 442 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 LRIG2O94898 1065 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 RARAP10276 462 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 RHOQP17081 205 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 DRD1P21728 446 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 COMTP21964 271 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 IL1R2P27930 398 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 OPRD1P41143 372 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 GRIA2P42262 883 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 RPS24P62847 133 aaKnown RBP14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 ZNF177Q13360 481 aaPredicted RBP14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 SLC12A1Q13621 1099 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 PDK2Q15119 407 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 E2F5Q15329 346 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 C14orf80Q86SX3 495 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 DAAM2Q86T65 1068 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 LRRC57Q8N9N7 239 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 TTC8Q8TAM2 541 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 FAM71BQ8TC56 605 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 FAM3CQ92520 227 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 CD101Q93033 1021 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 IGSF8Q969P0 613 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 ZNF830Q96NB3 372 aaPredicted RBP14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 PNKPQ96T60 521 aa14.75□□□□□ -0.05
HMGXB4-204ENST00000455359 ZYG11BQ9C0D3 744 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms