RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 A0A1B0GTW7 788 aa16.68■□□□□ 0.26
GPC1-206ENST00000455111 FAM221BA6H8Z2 402 aa16.68■□□□□ 0.26
GPC1-206ENST00000455111 BECN2A8MW95 431 aa16.68■□□□□ 0.26
GPC1-206ENST00000455111 TAF4O00268 1085 aa16.68■□□□□ 0.26
GPC1-206ENST00000455111 SYNCRIPO60506 623 aaKnown RBP16.68■□□□□ 0.26
GPC1-206ENST00000455111 CTSOP43234 321 aaPredicted RBP16.68■□□□□ 0.26
GPC1-206ENST00000455111 GCNT1Q02742 428 aa16.68■□□□□ 0.26
GPC1-206ENST00000455111 KCNT1Q5JUK3 1230 aa16.68■□□□□ 0.26
GPC1-206ENST00000455111 FOXR2Q6PJQ5 311 aa16.68■□□□□ 0.26
GPC1-206ENST00000455111 LAYNQ6UX15 382 aa16.68■□□□□ 0.26
GPC1-206ENST00000455111 RAB44Q7Z6P3 723 aaPredicted RBP16.68■□□□□ 0.26
GPC1-206ENST00000455111 TAC4Q86UU9 113 aa16.68■□□□□ 0.26
GPC1-206ENST00000455111 SCUBE3Q8IX30 993 aa16.68■□□□□ 0.26
GPC1-206ENST00000455111 HSFY1Q96LI6 401 aa16.68■□□□□ 0.26
GPC1-206ENST00000455111 SLC32A1Q9H598 525 aa16.68■□□□□ 0.26
GPC1-206ENST00000455111 SERGEFQ9UGK8 458 aa16.68■□□□□ 0.26
GPC1-206ENST00000455111 FNDC3AQ9Y2H6 1198 aaKnown RBP16.68■□□□□ 0.26
GPC1-206ENST00000455111 NFE2L3Q9Y4A8 694 aa16.68■□□□□ 0.26
GPC1-206ENST00000455111 NEUROG3Q9Y4Z2 214 aa16.68■□□□□ 0.26
GPC1-206ENST00000455111 FREM2Q5SZK8 3169 aa16.68■□□□□ 0.26
GPC1-206ENST00000455111 MEI4A8MW99 385 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 P4HA2O15460 535 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 PAPSS1O43252 624 aaPredicted RBP16.67■□□□□ 0.26
GPC1-206ENST00000455111 TIMM44O43615 452 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 IGLV3-25P01717 112 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 ATXN3P54252 364 aaPredicted RBP16.67■□□□□ 0.26
GPC1-206ENST00000455111 TBX4P57082 545 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 NUCB2P80303 420 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 RING1Q06587 406 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 TAF5Q15542 800 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 FNDC3BQ53EP0 1204 aaKnown RBP16.67■□□□□ 0.26
GPC1-206ENST00000455111 WDR45BQ5MNZ6 344 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 RABEPKQ7Z6M1 372 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 SLCO6A1Q86UG4 719 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 NAXDQ8IW45 347 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 AHI1Q8N157 1196 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 CFAP52Q8N1V2 620 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 HDDC3Q8N4P3 179 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 WDTC1Q8N5D0 677 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 BAHD1Q8TBE0 780 aaPredicted RBP16.67■□□□□ 0.26
GPC1-206ENST00000455111 WFIKKN2Q8TEU8 576 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 AZIN2Q96A70 460 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 CCDC34Q96HJ3 373 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 SLC4A5Q9BY07 1137 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 INTS2Q9H0H0 1204 aaKnown RBP16.67■□□□□ 0.26
GPC1-206ENST00000455111 MIR1-1HGQ9H1L0 117 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 EBF2Q9HAK2 575 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 TOR4AQ9NXH8 423 aa16.67■□□□□ 0.26
GPC1-206ENST00000455111 A0A1B0GVT2 93 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 GOLGA6L4A6NEF3 574 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 ZBTB24O43167 697 aaPredicted RBP16.66■□□□□ 0.26
GPC1-206ENST00000455111 SYPP08247 313 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 DLDP09622 509 aaKnown RBP16.66■□□□□ 0.26
GPC1-206ENST00000455111 NUMBP49757 651 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 MS4A13Q5J8X5 152 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 MPP7Q5T2T1 576 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 SYCP2LQ5T4T6 812 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 DBX2Q6ZNG2 339 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 IRF2BP1Q8IU81 584 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 PNPLA1Q8N8W4 532 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 FIBINQ8TAL6 211 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 TTC17Q96AE7 1141 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 NUP58Q9BVL2 599 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 SRRTQ9BXP5 876 aaKnown RBP16.66■□□□□ 0.26
GPC1-206ENST00000455111 LHX5Q9H2C1 402 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 STIM2Q9P246 746 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 SUSD2Q9UGT4 822 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 PCOLCE2Q9UKZ9 415 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.66■□□□□ 0.26
GPC1-206ENST00000455111 MSRB2Q9Y3D2 182 aa16.66■□□□□ 0.26
GPC1-206ENST00000455111 SRRM3A6NNA2 597 aaPredicted RBP16.65■□□□□ 0.26
GPC1-206ENST00000455111 E5RJQ4 531 aa16.65■□□□□ 0.26
GPC1-206ENST00000455111 BCAT2O15382 392 aaPredicted RBP16.65■□□□□ 0.26
GPC1-206ENST00000455111 IGHV4-34P06331 123 aa16.65■□□□□ 0.26
GPC1-206ENST00000455111 SLC9A1P19634 815 aa16.65■□□□□ 0.26
GPC1-206ENST00000455111 OXTRP30559 389 aa16.65■□□□□ 0.26
GPC1-206ENST00000455111 CSKP41240 450 aa16.65■□□□□ 0.26
GPC1-206ENST00000455111 CSNK1EP49674 416 aaKnown RBP16.65■□□□□ 0.26
GPC1-206ENST00000455111 ZNF445P59923 1031 aa16.65■□□□□ 0.26
GPC1-206ENST00000455111 SLC14A1Q13336 389 aa16.65■□□□□ 0.26
GPC1-206ENST00000455111 TRIP6Q15654 476 aaKnown RBP16.65■□□□□ 0.26
GPC1-206ENST00000455111 HLA-BQ31612 363 aa16.65■□□□□ 0.26
GPC1-206ENST00000455111 DCAF6Q58WW2 860 aa16.65■□□□□ 0.26
GPC1-206ENST00000455111 DPY19L2P1Q6NXN4 242 aa16.65■□□□□ 0.26
GPC1-206ENST00000455111 ZNF606Q8WXB4 792 aa16.65■□□□□ 0.26
GPC1-206ENST00000455111 BIRC7Q96CA5 298 aa16.65■□□□□ 0.26
GPC1-206ENST00000455111 BTBD3Q9Y2F9 522 aa16.65■□□□□ 0.26
GPC1-206ENST00000455111 LAMA5O15230 3695 aa16.65■□□□□ 0.26
GPC1-206ENST00000455111 DOCK9Q9BZ29 2069 aa16.65■□□□□ 0.26
GPC1-206ENST00000455111 KCNK3O14649 394 aa16.64■□□□□ 0.25
GPC1-206ENST00000455111 SIN3BO75182 1162 aa16.64■□□□□ 0.25
GPC1-206ENST00000455111 FBXO21O94952 628 aa16.64■□□□□ 0.25
GPC1-206ENST00000455111 AFPP02771 609 aaKnown RBP16.64■□□□□ 0.25
GPC1-206ENST00000455111 FTH1P19P0C7X4 201 aa16.64■□□□□ 0.25
GPC1-206ENST00000455111 GNSP15586 552 aa16.64■□□□□ 0.25
GPC1-206ENST00000455111 IRAK1P51617 712 aa16.64■□□□□ 0.25
GPC1-206ENST00000455111 STIM1Q13586 685 aa16.64■□□□□ 0.25
GPC1-206ENST00000455111 STILQ15468 1287 aa16.64■□□□□ 0.25
GPC1-206ENST00000455111 KIF19Q2TAC6 998 aa16.64■□□□□ 0.25
GPC1-206ENST00000455111 NUGGCQ68CJ6 796 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms