RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 VEGFBP49765 207 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 VARS2Q5ST30 1063 aaKnown RBP14.05□□□□□ -0.16
CLK3-203ENST00000454830 VSIG1Q86XK7 387 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 SPATS2Q86XZ4 545 aaKnown RBP14.05□□□□□ -0.16
CLK3-203ENST00000454830 PSTKQ8IV42 348 aaKnown RBP14.05□□□□□ -0.16
CLK3-203ENST00000454830 ZNF567Q8N184 647 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 SLAIN1Q8ND83 568 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 LINC01599Q8WXQ3 324 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 TTC17Q96AE7 1141 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 SGSM3Q96HU1 749 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 ZNF317Q96PQ6 595 aaPredicted RBP14.05□□□□□ -0.16
CLK3-203ENST00000454830 XAB2Q9HCS7 855 aaKnown RBP14.05□□□□□ -0.16
CLK3-203ENST00000454830 CAPN7Q9Y6W3 813 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 TBKBP1A7MCY6 615 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 ATP9BO43861 1147 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 LPXNO60711 386 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 ALDH2P05091 517 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 FDFT1P37268 417 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 LGSNQ5TDP6 509 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 MROH9Q5TGP6 573 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 CD300LGQ6UXG3 332 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 C4orf22Q6V702 233 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 KDELC2Q7Z4H8 507 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 SPOCK2Q92563 424 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 NT5C3BQ969T7 300 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 UNC93B1Q9H1C4 597 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 RRN3Q9NYV6 651 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 SMG5Q9UPR3 1016 aaKnown RBP14.05□□□□□ -0.16
CLK3-203ENST00000454830 I6L893 689 aaPredicted RBP14.05□□□□□ -0.16
CLK3-203ENST00000454830 C2CD2LO14523 706 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 OPHN1O60890 802 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 KRT37O76014 449 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 CYP11A1P05108 521 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 IRX4P78413 519 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 EFEMP1Q12805 493 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 RAB41Q5JT25 222 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 LHX8Q68G74 356 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 TRMT10BQ6PF06 316 aaKnown RBP14.05□□□□□ -0.16
CLK3-203ENST00000454830 CCDC63Q8NA47 563 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 PXYLP1Q8TE99 480 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 CKAP2Q8WWK9 683 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 FRMD8Q9BZ67 464 aaPredicted RBP14.05□□□□□ -0.16
CLK3-203ENST00000454830 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.05□□□□□ -0.162e-7■■■■□ 23.4
CLK3-203ENST00000454830 RNF208Q9H0X6 261 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 IL1RAPL1Q9NZN1 696 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 PDCD11Q14690 1871 aaKnown RBP14.04□□□□□ -0.16
CLK3-203ENST00000454830 MX2P20592 715 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 FAM133BQ5BKY9 247 aaKnown RBP14.04□□□□□ -0.16
CLK3-203ENST00000454830 FAM26DQ5JW98 314 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 UNC5AQ6ZN44 842 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 SEPT8Q92599 483 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 SLC9A7Q96T83 725 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 ABCC13Q9NSE7 274 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 USP3Q9Y6I4 520 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 SRRM3A6NNA2 597 aaPredicted RBP14.04□□□□□ -0.16
CLK3-203ENST00000454830 UGT1A9O60656 530 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 PYGBP11216 843 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 TYMPP19971 482 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 ADRA1DP25100 572 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 CCR1P32246 355 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 WDR4P57081 412 aaKnown RBP14.04□□□□□ -0.16
CLK3-203ENST00000454830 SLC1A5Q15758 541 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 NFE2Q16621 373 aaPredicted RBP14.04□□□□□ -0.16
CLK3-203ENST00000454830 TDRPQ86YL5 185 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 UNC5BQ8IZJ1 945 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 TTC9BQ8N6N2 239 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 NPWQ8N729 165 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 TCP10LQ8TDR4 215 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 CASP10Q92851 521 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 RTP4Q96DX8 246 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 FTHL17Q9BXU8 183 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 PPCSQ9HAB8 311 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 UGT1A7Q9HAW7 530 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 UGT1A10Q9HAW8 530 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 UGT1A8Q9HAW9 530 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 ZMYND8Q9ULU4 1186 aaPredicted RBP14.04□□□□□ -0.16
CLK3-203ENST00000454830 PCDHB5Q9Y5E4 795 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 CXorf49A8MYA2 514 aaPredicted RBP14.04□□□□□ -0.16
CLK3-203ENST00000454830 ZNF487B1APH4 448 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 SPAG6O75602 509 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 DGKIO75912 1065 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 APOEP02649 317 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 PGFP49763 221 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 CORO7P57737 925 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 NTAN1Q96AB6 310 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 ATXN7L3BQ96GX2 97 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 NACA2Q9H009 215 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 CSNK1G1Q9HCP0 422 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 ACTL7BQ9Y614 415 aa14.04□□□□□ -0.16
CLK3-203ENST00000454830 PAGE1O75459 146 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 SUN1O94901 812 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 NKX3-2P78367 333 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 DPYSQ14117 519 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 ADGRD1Q6QNK2 874 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 SLC26A11Q86WA9 606 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 COLGALT2Q8IYK4 626 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 REM2Q8IYK8 340 aaPredicted RBP14.03□□□□□ -0.16
CLK3-203ENST00000454830 AGGF1Q8N302 714 aaeCLIP14.03□□□□□ -0.16
CLK3-203ENST00000454830 OR52K1Q8NGK4 314 aa14.03□□□□□ -0.16
CLK3-203ENST00000454830 EBNA1BP2Q99848 306 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms