RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ZNF844Q08AG5 666 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 BIRC3Q13489 604 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 FRG1Q14331 258 aaKnown RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 ANKRD20A8PQ5CZ79 823 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 MPP7Q5T2T1 576 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 BSPRYQ5W0U4 402 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 HDXQ7Z353 690 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 GRIN3AQ8TCU5 1115 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 ZNF592Q92610 1267 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 ZIM3Q96PE6 472 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 CSPG4P5Q96PW8 444 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 C19orf43Q9BQ61 176 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 ARHGEF4Q9NR80 690 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 IP6K2Q9UHH9 426 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 MIF4GDA9UHW6 222 aaKnown RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 TRAFD1O14545 582 aaPredicted RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 TLL1O43897 1013 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 PHF2O75151 1096 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 AP1G2O75843 785 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 PRAMEF12O95522 483 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 LTFP02788 710 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 ITGAVP06756 1048 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 FNTAP49354 379 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 IFI35P80217 286 aaPredicted RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 DUSP4Q13115 394 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 TRPC3Q13507 836 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 CUL1Q13616 776 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 BRMS1LQ5PSV4 323 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 ALS2CLQ60I27 953 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 MFSD7Q6UXD7 560 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 KDM7AQ6ZMT4 941 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 SPOCD1Q6ZMY3 1216 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 HACE1Q8IYU2 909 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 GDPD5Q8WTR4 605 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 FRS2Q8WU20 508 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 ATXN2LQ8WWM7 1075 aaKnown RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 QKIQ96PU8 341 aaKnown RBP eCLIP5.14□□□□□ -1.593e-6■■■■■ 31.9
RIF1-207ENST00000454583 DCLK3Q9C098 648 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 PLEKHA4Q9H4M7 779 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 ABCC13Q9NSE7 274 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 ADAM22Q9P0K1 906 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 CDH22Q9UJ99 828 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 INTS6Q9UL03 887 aaKnown RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 USP18Q9UMW8 372 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 CCDC66A2RUB6 948 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 CCDC172P0C7W6 258 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 OR1D2P34982 312 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 RDXP35241 583 aaKnown RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 ADRA1BP35368 520 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 GGCXP38435 758 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 PPIDQ08752 370 aaKnown RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 DHX34Q14147 1143 aaKnown RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 NFE2Q16621 373 aaPredicted RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 EML3Q32P44 896 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 CTXN3Q4LDR2 81 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 HIBCHQ6NVY1 386 aaPredicted RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 LRRC31Q6UY01 552 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 SLC13A5Q86YT5 568 aaPredicted RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 ALLCQ8N6M5 410 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 PLD4Q96BZ4 506 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 HEXIM2Q96MH2 286 aaKnown RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 ASB16Q96NS5 453 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 RNF157Q96PX1 679 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 TCF25Q9BQ70 676 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 TCHPQ9BT92 498 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 TRIM6Q9C030 488 aaPredicted RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 DTLQ9NZJ0 730 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 ADAM21Q9UKJ8 722 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 AGO1Q9UL18 857 aaKnown RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 HBS1LQ9Y450 684 aaKnown RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 RAD54BQ9Y620 910 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 HOXC11O43248 304 aaPredicted RBP5.13□□□□□ -1.59
RIF1-207ENST00000454583 SART1O43290 800 aaKnown RBP5.13□□□□□ -1.59
RIF1-207ENST00000454583 RTN3O95197 1032 aaPredicted RBP5.13□□□□□ -1.59
RIF1-207ENST00000454583 MYCP01106 439 aaPredicted RBP5.13□□□□□ -1.59
RIF1-207ENST00000454583 CEBPBP17676 345 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 OAS2P29728 719 aaKnown RBP5.13□□□□□ -1.59
RIF1-207ENST00000454583 HSD17B3P37058 310 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 RPL21P46778 160 aaKnown RBP5.13□□□□□ -1.59
RIF1-207ENST00000454583 CETN1Q12798 172 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 XRCC4Q13426 336 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 BTG3Q14201 252 aaPredicted RBP5.13□□□□□ -1.59
RIF1-207ENST00000454583 RAB30Q15771 203 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 C4orf50Q6ZRC1 276 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 DNAJB7Q7Z6W7 309 aaPredicted RBP5.13□□□□□ -1.59
RIF1-207ENST00000454583 ADIPOR2Q86V24 386 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 CCDC117Q8IWD4 279 aaPredicted RBP5.13□□□□□ -1.59
RIF1-207ENST00000454583 SYCE1Q8N0S2 351 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 NAT8LQ8N9F0 302 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 NELL1Q92832 810 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 TTC17Q96AE7 1141 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 ARL8AQ96BM9 186 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 HDAC11Q96DB2 347 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 PABPC5Q96DU9 382 aaKnown RBP5.13□□□□□ -1.59
RIF1-207ENST00000454583 RNPC3Q96LT9 517 aaKnown RBP5.13□□□□□ -1.59
RIF1-207ENST00000454583 LGALS13Q9UHV8 139 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 GINS2Q9Y248 185 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 SLC27A5Q9Y2P5 690 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 FAM187AA6NFU0 413 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms