RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHD3-206ENST00000452447 OR2T3Q8NH03 318 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 SLC39A13Q96H72 371 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 NOX5Q96PH1 765 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 TUBGCP2Q9BSJ2 902 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 GTPBP2Q9BX10 602 aaKnown RBP13.37□□□□□ -0.27
CHD3-206ENST00000452447 NDST4Q9H3R1 872 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 WSB2Q9NYS7 404 aaPredicted RBP13.37□□□□□ -0.27
CHD3-206ENST00000452447 USP36Q9P275 1121 aaKnown RBP13.37□□□□□ -0.27
CHD3-206ENST00000452447 TJP2Q9UDY2 1190 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 SUSD2Q9UGT4 822 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 DNAJC12Q9UKB3 198 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 MEI4A8MW99 385 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 TRUB2O95900 331 aaKnown RBP13.37□□□□□ -0.27
CHD3-206ENST00000452447 GNSP15586 552 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 CD70P32970 193 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 KRT9P35527 623 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 TPMTP51580 245 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 COPAP53621 1224 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 SNX16P57768 344 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 RPS24P62847 133 aaKnown RBP13.37□□□□□ -0.27
CHD3-206ENST00000452447 CDH18Q13634 790 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 VWA3BQ502W6 1294 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 HSP90AA4PQ58FG1 418 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 DCAF6Q58WW2 860 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 SH3PXD2AQ5TCZ1 1133 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 SMYD5Q6GMV2 418 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 KIAA0907Q7Z7F0 614 aaPredicted RBP13.37□□□□□ -0.27
CHD3-206ENST00000452447 PASD1Q8IV76 773 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 CARNMT1Q8N4J0 409 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 ZNF366Q8N895 744 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 FIBINQ8TAL6 211 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 WFDC5Q8TCV5 224 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 PPP1R13BQ96KQ4 1090 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 CNTNAP3BQ96NU0 1288 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 ANP32EQ9BTT0 268 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 NUP58Q9BVL2 599 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 GPR174Q9BXC1 333 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 CNTNAP3Q9BZ76 1288 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 NUCKS1Q9H1E3 243 aaKnown RBP13.37□□□□□ -0.27
CHD3-206ENST00000452447 TMEM245Q9H330 911 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 SLC12A6Q9UHW9 1150 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 PCDHGC3Q9UN70 934 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 CEP83Q9Y592 693 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 KCNJ18B7U540 433 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 SYPP08247 313 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 ST8SIA6P61647 398 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 CDK17Q00537 523 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 CAMK2GQ13555 558 aaPredicted RBP13.36□□□□□ -0.27
CHD3-206ENST00000452447 PTPRNQ16849 979 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 ZC3H12AQ5D1E8 599 aaKnown RBP13.36□□□□□ -0.27
CHD3-206ENST00000452447 MS4A13Q5J8X5 152 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 EFHC1Q5JVL4 640 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 CFAP52Q8N1V2 620 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 HDDC3Q8N4P3 179 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 WDTC1Q8N5D0 677 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 CADM4Q8NFZ8 388 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 BTN2A3PQ96KV6 586 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 PRICKLE1Q96MT3 831 aaPredicted RBP13.36□□□□□ -0.27
CHD3-206ENST00000452447 CPXM1Q96SM3 734 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 LHX5Q9H2C1 402 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 PDCL3Q9H2J4 239 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 SYNCQ9H7C4 482 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 FAM204AQ9H8W3 233 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 FBRSQ9HAH7 460 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 CAPN10Q9HC96 672 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 FSCN3Q9NQT6 498 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.36□□□□□ -0.27
CHD3-206ENST00000452447 SUN2Q9UH99 717 aa13.36□□□□□ -0.27
CHD3-206ENST00000452447 H0Y626 953 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 FOXN3O00409 490 aaPredicted RBP13.35□□□□□ -0.27
CHD3-206ENST00000452447 ARHGAP33O14559 1287 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 MOCS3O95396 460 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 ASLP04424 464 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 GLI1P08151 1106 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 SLC2A3P11169 496 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 CEACAM1P13688 526 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 CSRP1P21291 193 aaKnown RBP13.35□□□□□ -0.27
CHD3-206ENST00000452447 ABCB4P21439 1286 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 MAOBP27338 520 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 BPIFB4P59827 614 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 TAF5Q15542 800 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 PLEKHG6Q3KR16 790 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 CT47A1Q5JQC4 288 aaPredicted RBP13.35□□□□□ -0.27
CHD3-206ENST00000452447 CHSY1Q86X52 802 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 LGI2Q8N0V4 545 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 ATP6V0D2Q8N8Y2 350 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 RNF34Q969K3 372 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 SLC32A1Q9H598 525 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 SIX2Q9NPC8 291 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 ANGPTL2Q9UKU9 493 aa13.35□□□□□ -0.27
CHD3-206ENST00000452447 SYNJ2BP-COX16A0A087WUM0 186 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 F5H5T6 163 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 GIPC1O14908 333 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 HSF2BPO75031 334 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 IGLV3-19P01714 112 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 IGLV3-25P01717 112 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 DNTTP04053 509 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 RAPGEF1Q13905 1077 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 KCNJ12Q14500 433 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms