RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 DEFB106AQ8N104 65 aa14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 PARVBQ9HBI1 364 aa14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 UBA2Q9UBT2 640 aaPredicted RBP14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 POLG2Q9UHN1 485 aa14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 MEGF6O75095 1541 aa14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 SLITRK3O94933 977 aa14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 KPNB1Q14974 876 aaKnown RBP14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 GRTP1Q5TC63 336 aa14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 PDPK2PQ6A1A2 396 aa14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 TMEM199Q8N511 208 aa14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 AGRPO00253 132 aa14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 MLH1P40692 756 aa14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 CES5AQ6NT32 575 aa14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 USP7Q93009 1102 aa14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 OMDQ99983 421 aa14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 DPY30Q9C005 99 aa14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 CDC42EP4Q9H3Q1 356 aaKnown RBP14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 DNAJC5Q9H3Z4 198 aa14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 NR2E3Q9Y5X4 410 aa14.3□□□□□ -0.12
RAPGEF3-205ENST00000449771 A0A1B0GW55 424 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 ATP5BP06576 529 aaKnown RBP14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 DUX4L2P0CJ85 424 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 DUX4L3P0CJ86 424 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 DUX4L4P0CJ87 422 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 DUX4L5P0CJ88 424 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 DUX4L6P0CJ89 424 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 DUX4L7P0CJ90 424 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 CTSEP14091 401 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 ATAD3BQ5T9A4 648 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 FBXL19Q6PCT2 694 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 CYP20A1Q6UW02 462 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 ZSWIM2Q8NEG5 633 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 ACTRT1Q8TDG2 376 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 HTR3CQ8WXA8 447 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 ZNF606Q8WXB4 792 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 REPS1Q96D71 796 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 PRRG3Q9BZD7 231 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 KLHL25Q9H0H3 589 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 DUX4Q9UBX2 424 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 SNX13Q9Y5W8 968 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 TBC1D3BA6NDS4 549 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 CABYRO75952 493 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 NUDT14O95848 222 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 YBX3P16989 372 aaKnown RBP eCLIP14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 PGAM1P18669 254 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 ATP6V1C1P21283 382 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 BGNP21810 368 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 PEX5P50542 639 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 CDH8P55286 799 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 KLHL23Q8NBE8 558 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 PPP1R16AQ96I34 528 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 PIH1D1Q9NWS0 290 aaKnown RBP14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 ZNF839A8K0R7 811 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 CCT8P50990 548 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 XRCC4Q13426 336 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 ZNF544Q6NX49 715 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 OTOP1Q7RTM1 612 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 NECAB2Q7Z6G3 386 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 CYP4Z2PQ8N1L4 340 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 OMA1Q96E52 524 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 TKTL2Q9H0I9 626 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 IL17RBQ9NRM6 502 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 ITSN1Q15811 1721 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 TK2O00142 265 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 PIK3CDO00329 1044 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 TYMPP19971 482 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 MGAT1P26572 445 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 LLGL2Q6P1M3 1020 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 CLYBLQ8N0X4 340 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 TMEM120AQ9BXJ8 343 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 KCNQ5Q9NR82 932 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 CAPN6Q9Y6Q1 641 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 CLTBP09497 229 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 SLC6A3Q01959 620 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 DSG1Q02413 1049 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 TRAF2Q12933 501 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 MAD2L1Q13257 205 aaPredicted RBP14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 ARMC12Q5T9G4 340 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 FBXO39Q8N4B4 442 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 DPP10Q8N608 796 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 LZTR1Q8N653 840 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 MCOLN3Q8TDD5 553 aa14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 ZNF483Q8TF39 744 aaPredicted RBP14.29□□□□□ -0.12
RAPGEF3-205ENST00000449771 ATP6V1G2O95670 118 aa14.28□□□□□ -0.12
RAPGEF3-205ENST00000449771 LTFP02788 710 aa14.28□□□□□ -0.12
RAPGEF3-205ENST00000449771 SPANXN3Q5MJ09 141 aa14.28□□□□□ -0.12
RAPGEF3-205ENST00000449771 TMEM86AQ8N2M4 240 aa14.28□□□□□ -0.12
RAPGEF3-205ENST00000449771 CENPTQ96BT3 561 aa14.28□□□□□ -0.12
RAPGEF3-205ENST00000449771 TRHDEQ9UKU6 1024 aa14.28□□□□□ -0.12
RAPGEF3-205ENST00000449771 KANSL1LA0AUZ9 987 aa14.28□□□□□ -0.12
RAPGEF3-205ENST00000449771 ENO2P09104 434 aaPredicted RBP14.28□□□□□ -0.12
RAPGEF3-205ENST00000449771 NPY2RP49146 381 aa14.28□□□□□ -0.12
RAPGEF3-205ENST00000449771 POLR2LP62875 67 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-205ENST00000449771 PKN2Q16513 984 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-205ENST00000449771 ZCWPW2Q504Y3 356 aa14.28□□□□□ -0.12
RAPGEF3-205ENST00000449771 CCDC149Q6ZUS6 474 aa14.28□□□□□ -0.12
RAPGEF3-205ENST00000449771 USP45Q70EL2 814 aa14.28□□□□□ -0.12
RAPGEF3-205ENST00000449771 DNAAF5Q86Y56 855 aa14.28□□□□□ -0.12
RAPGEF3-205ENST00000449771 CXorf40AQ8TE69 158 aa14.28□□□□□ -0.12
RAPGEF3-205ENST00000449771 ZNF558Q96NG5 402 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms