RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 S100A13Q99584 98 aa13.03□□□□□ -0.32
AC006001.3-201ENST00000449307 A1CFQ9NQ94 594 aaKnown RBP13.03□□□□□ -0.32
AC006001.3-201ENST00000449307 NCOA3Q9Y6Q9 1424 aa13.03□□□□□ -0.32
AC006001.3-201ENST00000449307 TMEM253P0C7T8 217 aa13.03□□□□□ -0.32
AC006001.3-201ENST00000449307 TFE3P19532 575 aaPredicted RBP13.03□□□□□ -0.32
AC006001.3-201ENST00000449307 SHMT1P34896 483 aa13.03□□□□□ -0.32
AC006001.3-201ENST00000449307 NEK2P51955 445 aa13.03□□□□□ -0.32
AC006001.3-201ENST00000449307 E2F7Q96AV8 911 aa13.03□□□□□ -0.32
AC006001.3-201ENST00000449307 C2orf49Q9BVC5 232 aaPredicted RBP13.03□□□□□ -0.32
AC006001.3-201ENST00000449307 OR10H1Q9Y4A9 318 aa13.03□□□□□ -0.32
AC006001.3-201ENST00000449307 PIK3C2BO00750 1634 aa13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 C16orf96A6NNT2 1141 aa13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 ZNF500O60304 480 aaPredicted RBP13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 ANTXR2P58335 489 aa13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 ZFPM1Q8IX07 1006 aa13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 RIPOR3Q96MK2 946 aa13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 SYT17Q9BSW7 474 aa13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 CACNB4O00305 520 aaPredicted RBP13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 CSH1P0DML2 217 aa13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 CSH2P0DML3 217 aa13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 UQCRBP14927 111 aa13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 PSMD8P48556 350 aa13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 UAP1L1Q3KQV9 507 aa13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 CBWD6Q4V339 395 aa13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 ALLCQ8N6M5 410 aa13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 EFCAB3Q8N7B9 438 aa13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 C12orf50Q8NA57 414 aaPredicted RBP13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 ILKAPQ9H0C8 392 aaPredicted RBP13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 BPIFA1Q9NP55 256 aa13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 DDX28Q9NUL7 540 aaKnown RBP13.02□□□□□ -0.32
AC006001.3-201ENST00000449307 SNTNA6NMZ2 147 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 WBP4O75554 376 aaKnown RBP13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 MMP13P45452 471 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 GRIK3Q13003 919 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 PEX6Q13608 980 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 NFIL3Q16649 462 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 TNS2Q63HR2 1409 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 CATSPER1Q8NEC5 780 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 TAS1R2Q8TE23 839 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 CCDC126Q96EE4 140 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 ATP6V1G3Q96LB4 118 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 ARHGAP9Q9BRR9 750 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 MRPS17Q9Y2R5 130 aaKnown RBP13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 IFNA14P01570 189 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 CHKAP35790 457 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 HNF4AP41235 474 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 VAC14Q08AM6 782 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 TMEM86AQ8N2M4 240 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 ZSWIM2Q8NEG5 633 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 ATG4AQ8WYN0 398 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 PARVBQ9HBI1 364 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 TPST1O60507 370 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 NFYCQ13952 458 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 ATP6AP1LQ52LC2 224 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 DEFB106AQ8N104 65 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 PURBQ96QR8 312 aaKnown RBP13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 PANX3Q96QZ0 392 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 CPS1P31327 1500 aa13.02□□□□□ -0.33
AC006001.3-201ENST00000449307 PDE2AO00408 941 aaPredicted RBP13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 KLHL2O95198 593 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 RASGRP1O95267 797 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 ALAS2P22557 587 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 COILP38432 576 aaPredicted RBP13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 GRAMD1AQ96CP6 724 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 CMTM5Q96DZ9 223 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 TBL1YQ9BQ87 522 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 DCDC2Q9UHG0 476 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 TIPRLO75663 272 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 SLC25A12O75746 678 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 USP49Q70CQ1 688 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 SPATA21Q7Z572 469 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 IL17RAQ96F46 866 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 ZBTB45Q96K62 511 aaPredicted RBP13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 ULBP1Q9BZM6 244 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 MANSC1Q9H8J5 431 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 NOP53Q9NZM5 478 aaKnown RBP13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 STOML1Q9UBI4 398 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 TRBV23OR9-2A0A075B6M9 112 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 TIMM44O43615 452 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 CLK1P49759 484 aaKnown RBP13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 KCNA10Q16322 511 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 REM2Q8IYK8 340 aaPredicted RBP13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 TATDN2Q93075 761 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 ZNF711Q9Y462 761 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 COPG1Q9Y678 874 aaKnown RBP13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 CHN1P15882 459 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 AMPD1P23109 780 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 GPR15P49685 360 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 ERVK-21P61565 698 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 KCNS3Q9BQ31 491 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 TCF25Q9BQ70 676 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 TBCDQ9BTW9 1192 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 DPY30Q9C005 99 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 INPP4BO15327 924 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 PTPN1P18031 435 aaKnown RBP13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 FKBP1BP68106 108 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 DDR1Q08345 913 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 TREML2Q5T2D2 321 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 FAM20CQ8IXL6 584 aa13.01□□□□□ -0.33
AC006001.3-201ENST00000449307 JSRP1Q96MG2 331 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms