RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 LNP1A1A4G5 178 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 TYW5A2RUC4 315 aaKnown RBP15.12■□□□□ 0.01
USP39-206ENST00000448971 TBC1D3BA6NDS4 549 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 ANTXRLA6NF34 631 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 PENKP01210 267 aaPredicted RBP15.12■□□□□ 0.01
USP39-206ENST00000448971 CYP1A1P04798 512 aaPredicted RBP15.12■□□□□ 0.01
USP39-206ENST00000448971 TPM3P06753 285 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 GBP1P32455 592 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 TIE1P35590 1138 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 GABRB2P47870 512 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 SULT1E1P49888 294 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 RNASE9P60153 205 aaKnown RBP15.12■□□□□ 0.01
USP39-206ENST00000448971 PITX1P78337 314 aaPredicted RBP15.12■□□□□ 0.01
USP39-206ENST00000448971 MESP2Q0VG99 397 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 ELF2Q15723 593 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 ASIC2Q16515 512 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 MPPE1Q53F39 396 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 C2orf27AQ580R0 203 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 FYB2Q5VWT5 728 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 XYLT1Q86Y38 959 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 FAM217AQ8IXS0 508 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 PHTF2Q8N3S3 785 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 RNF214Q8ND24 703 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 ZNF397Q8NF99 534 aaPredicted RBP15.12■□□□□ 0.01
USP39-206ENST00000448971 BAP1Q92560 729 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 RNF34Q969K3 372 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 EDEM2Q9BV94 578 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 IFNKQ9P0W0 207 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 MYO6Q9UM54 1294 aa15.12■□□□□ 0.01
USP39-206ENST00000448971 FASNP49327 2511 aaKnown RBP15.11■□□□□ 0.01
USP39-206ENST00000448971 C1QTNF9BB2RNN3 333 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 K7EQS6 105 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 CDX4O14627 284 aaPredicted RBP15.11■□□□□ 0.01
USP39-206ENST00000448971 TRIM24O15164 1050 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 ACSL4O60488 711 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 C1QTNF9P0C862 333 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 CHRNB2P17787 502 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 SCNN1AP37088 669 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 NME3Q13232 169 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 NR1I3Q14994 352 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 ADGRF1Q5T601 910 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 PMS2CLQ68D20 193 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 RASSF3Q86WH2 238 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 CHSY1Q86X52 802 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 SFTPA1Q8IWL2 248 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 USP33Q8TEY7 942 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 AGPAT1Q99943 283 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 DDX50Q9BQ39 737 aaKnown RBP15.11■□□□□ 0.01
USP39-206ENST00000448971 METTL5Q9NRN9 209 aaKnown RBP15.11■□□□□ 0.01
USP39-206ENST00000448971 STOML2Q9UJZ1 356 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 INVSQ9Y283 1065 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 MYOFQ9NZM1 2061 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 PKD1L2Q7Z442 2459 aa15.11■□□□□ 0.01
USP39-206ENST00000448971 M0QYT0 321 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 KLF8O95600 359 aaPredicted RBP15.1■□□□□ 0.01
USP39-206ENST00000448971 IGLV3-25P01717 112 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 ABCB4P21439 1286 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 NOS2P35228 1153 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 MATKP42679 507 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 NOVA1P51513 510 aaKnown RBP15.1■□□□□ 0.01
USP39-206ENST00000448971 DGKEP52429 567 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 MRPS21P82921 87 aaKnown RBP15.1■□□□□ 0.01
USP39-206ENST00000448971 CENPCQ03188 943 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 CLEC16AQ2KHT3 1053 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 ZC3H12AQ5D1E8 599 aaKnown RBP15.1■□□□□ 0.01
USP39-206ENST00000448971 SFMBT2Q5VUG0 894 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 RFWD3Q6PCD5 774 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 CCDC33Q8N5R6 958 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 ALLCQ8N6M5 410 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 ZNF513Q8N8E2 541 aaPredicted RBP15.1■□□□□ 0.01
USP39-206ENST00000448971 ATP6V0D2Q8N8Y2 350 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 KDF1Q8NAX2 398 aaPredicted RBP15.1■□□□□ 0.01
USP39-206ENST00000448971 SLC30A5Q8TAD4 765 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 SLC39A13Q96H72 371 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 PCDHB18PQ96TA0 734 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 TMEM121BQ9BXQ6 578 aaPredicted RBP15.1■□□□□ 0.01
USP39-206ENST00000448971 TTYH3Q9C0H2 523 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 ZDHHC4Q9NPG8 344 aa15.1■□□□□ 0.01
USP39-206ENST00000448971 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.1■□□□□ 0.01
USP39-206ENST00000448971 DSPP15924 2871 aaKnown RBP15.1■□□□□ 0.01
USP39-206ENST00000448971 GOLGA6L7A0A1B0GV03 622 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 SLC2A3P11169 496 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 UNGP13051 313 aaPredicted RBP15.09■□□□□ 0.01
USP39-206ENST00000448971 MMP8P22894 467 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 HOXD9P28356 352 aaPredicted RBP15.09■□□□□ 0.01
USP39-206ENST00000448971 SLC6A4P31645 630 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 CCR1P32246 355 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 TNFRSF4P43489 277 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 SGSHP51688 502 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 USP39Q53GS9 565 aaKnown RBP15.09■□□□□ 0.01
USP39-206ENST00000448971 TDRD12Q587J7 1177 aaKnown RBP15.09■□□□□ 0.01
USP39-206ENST00000448971 FAM133BQ5BKY9 247 aaKnown RBP15.09■□□□□ 0.01
USP39-206ENST00000448971 FIGNQ5HY92 759 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 SH3PXD2AQ5TCZ1 1133 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 DAB2IPQ5VWQ8 1189 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 RAP1GAP2Q684P5 730 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 NADSYN1Q6IA69 706 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 UNQ6494/PRO21346Q6UXR6 183 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 SND1Q7KZF4 910 aaKnown RBP eCLIP15.09■□□□□ 0.01
USP39-206ENST00000448971 TRMT11Q7Z4G4 463 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms