RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 RIF1Q5UIP0 2472 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 TIMM44O43615 452 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZRANB2O95218 330 aaKnown RBP eCLIP5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 FDPSP14324 419 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 ARL2P36404 184 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 CSE1LP55060 971 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 EVCP57679 992 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 TAS2R50P59544 299 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 YWHAGP61981 247 aaKnown RBP eCLIP5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 ILF3Q12906 894 aaKnown RBP eCLIP5.79□□□□□ -1.483e-7■■■■■ 31.9
CDC42BPA-209ENST00000448940 STK4Q13043 487 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 ANKRD20A8PQ5CZ79 823 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 RAB44Q7Z6P3 723 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 GKN2Q86XP6 184 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 OTUB2Q96DC9 234 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 JSRP1Q96MG2 331 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 HEBP1Q9NRV9 189 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 TRMT1Q9NXH9 659 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 ERVK-11Q9UQG0 969 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 CLUHO75153 1309 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 MTSS1O43312 755 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 OPA1O60313 960 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 PRNPP04156 253 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 ASLP04424 464 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 ITGB1P05556 798 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 RPL21P46778 160 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 RFX3P48380 749 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 KCNC4Q03721 635 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 GPR17Q13304 367 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 CHST9Q7L1S5 443 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 PPM1NQ8N819 430 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 PIP4K2CQ8TBX8 421 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 EFHD1Q9BUP0 239 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 LZTFL1Q9NQ48 299 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 SMYD2Q9NRG4 433 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 HCN3Q9P1Z3 774 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 TUBGCP4Q9UGJ1 667 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 SLC27A6Q9Y2P4 619 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 C3orf70A6NLC5 250 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 A8MX80 341 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZBTB22O15209 634 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 RFPL2O75678 378 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 SATB1Q01826 763 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 CAMK2GQ13555 558 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 MMS22LQ6ZRQ5 1243 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 C1orf186Q6ZWK4 172 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 TAS1R3Q7RTX0 852 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 TRAPPC5Q8IUR0 188 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 KAT2BQ92831 832 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 FAR2Q96K12 515 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 NSRP1Q9H0G5 558 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 THSD1Q9NS62 852 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 DDX56Q9NY93 547 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 MAFFQ9ULX9 164 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 RP1P56715 2156 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 TRIM49BA6NDI0 452 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 MUSKO15146 869 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 NBNO60934 754 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 CHRNA1P02708 482 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 IL9P15248 144 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 LILRA4P59901 499 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 MYBPHQ13203 477 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZNF677Q86XU0 584 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 CDKL3Q8IVW4 592 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 TP53INP2Q8IXH6 220 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 RPLP0P6Q8NHW5 317 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 ENOX1Q8TC92 643 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 TAS1R2Q8TE23 839 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 MR1Q95460 341 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 CACNA2D2Q9NY47 1150 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 BFARQ9NZS9 450 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 MEN1O00255 615 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 PCCBP05166 539 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 LSP1P33241 339 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 VPS41P49754 854 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 BCL2L1Q07817 233 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 LONRF2Q1L5Z9 754 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 BOLA3Q53S33 107 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 ANKRD54Q6NXT1 300 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 LZTR1Q8N653 840 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 HDAC11Q96DB2 347 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 SNX27Q96L92 541 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 HSFY1Q96LI6 401 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 CDHR5Q9HBB8 845 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 WASF2Q9Y6W5 498 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 PPFIA2O75334 1257 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 GPC5P78333 572 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 PPP2R2BQ00005 443 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 SIGLEC14Q08ET2 396 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 TREML1Q86YW5 311 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 PHYKPLQ8IUZ5 450 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 HAS1Q92839 578 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 PADI2Q9Y2J8 665 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 STARD13Q9Y3M8 1113 aa5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 MARF1Q9Y4F3 1742 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-209ENST00000448940 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 C2orf71A6NGG8 1288 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 C4orf47A7E2U8 309 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 TRDMT1O14717 391 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 PALMO75781 387 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms