RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 COPAP53621 1224 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 SARNPP82979 210 aaKnown RBP14.05□□□□□ -0.16
POLR1B-209ENST00000448770 BIRC2Q13490 618 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 ZRSR2Q15696 482 aaKnown RBP14.05□□□□□ -0.16
POLR1B-209ENST00000448770 PDPK2PQ6A1A2 396 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 ISLR2Q6UXK2 745 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 PLPPR4Q7Z2D5 763 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 WDR75Q8IWA0 830 aaKnown RBP14.05□□□□□ -0.16
POLR1B-209ENST00000448770 TNS4Q8IZW8 715 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 NDRG1Q92597 394 aaKnown RBP14.05□□□□□ -0.16
POLR1B-209ENST00000448770 TBCBQ99426 244 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 SPATC1LQ9H0A9 340 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 GLRA3O75311 464 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 CNMDO75829 334 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 DGKIO75912 1065 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 SERPINE1P05121 402 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 MLH1P40692 756 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 PGGT1BP53609 377 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 ASPHQ12797 758 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 ITGA9Q13797 1035 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 C6orf163Q5TEZ5 329 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 AP1ARQ63HQ0 302 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 ADGRG6Q86SQ4 1221 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 ACVR1CQ8NER5 493 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 ATXN7L3BQ96GX2 97 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 FCRL3Q96P31 734 aaPredicted RBP14.05□□□□□ -0.16
POLR1B-209ENST00000448770 GBP5Q96PP8 586 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 PCDHGB4Q9UN71 923 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 POMPQ9Y244 141 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 PCDHGB5Q9Y5G0 923 aa14.05□□□□□ -0.16
POLR1B-209ENST00000448770 FKBP6O75344 327 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 MCF2P10911 925 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 ALOX15P16050 662 aaPredicted RBP14.04□□□□□ -0.16
POLR1B-209ENST00000448770 GSTT1P30711 240 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 CDK7P50613 346 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 DLG2Q15700 870 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 SLC9B1Q4ZJI4 515 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 SH3D19Q5HYK7 790 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 HEATR6Q6AI08 1181 aaKnown RBP14.04□□□□□ -0.16
POLR1B-209ENST00000448770 DEFB107AQ8IZN7 70 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 ZNF781Q8N8C0 355 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 HTR3CQ8WXA8 447 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 PPP2R3CQ969Q6 453 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 PGBD4Q96DM1 585 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 ZMAT2Q96NC0 199 aaKnown RBP14.04□□□□□ -0.16
POLR1B-209ENST00000448770 TRIM4Q9C037 500 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 ZDHHC7Q9NXF8 308 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 COPG2Q9UBF2 871 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 APOBEC2Q9Y235 224 aaKnown RBP14.04□□□□□ -0.16
POLR1B-209ENST00000448770 A0A0A0MRY4 1105 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 STK10O94804 968 aaKnown RBP14.04□□□□□ -0.16
POLR1B-209ENST00000448770 CCDC130P13994 396 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 RPS12P25398 132 aaKnown RBP14.04□□□□□ -0.16
POLR1B-209ENST00000448770 PSMB4P28070 264 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 IRF9Q00978 393 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 AAGABQ6PD74 315 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 ACAD11Q709F0 780 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 RASSF3Q86WH2 238 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 HACE1Q8IYU2 909 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 COLGALT1Q8NBJ5 622 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.04□□□□□ -0.16
POLR1B-209ENST00000448770 ACTRT2Q8TDY3 377 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 GDPD5Q8WTR4 605 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 CENPIQ92674 756 aaPredicted RBP14.04□□□□□ -0.16
POLR1B-209ENST00000448770 SPATA13Q96N96 652 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 GORASP1Q9BQQ3 440 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 ASB7Q9H672 318 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 TXNRD2Q9NNW7 524 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 PRMT7Q9NVM4 692 aaPredicted RBP14.04□□□□□ -0.16
POLR1B-209ENST00000448770 ITGA11Q9UKX5 1188 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 SNX9Q9Y5X1 595 aa14.04□□□□□ -0.16
POLR1B-209ENST00000448770 ANKRD33BA6NCL7 494 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 DCXO43602 365 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 CCR10P46092 362 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 LIN52Q52LA3 116 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 STXBP5Q5T5C0 1151 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 OTUD1Q5VV17 481 aaPredicted RBP14.03□□□□□ -0.16
POLR1B-209ENST00000448770 FAM131BQ86XD5 332 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 AGR3Q8TD06 166 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 SPATA16Q9BXB7 569 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 OCEL1Q9H607 264 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 DNAJC28Q9NX36 388 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 GGA3Q9NZ52 723 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 TUBGCP4Q9UGJ1 667 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 HES2Q9Y543 173 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 ZSWIM8A7E2V4 1837 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 E9PBE3 544 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 KLHL41O60662 606 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 USP12O75317 370 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 OR6B1O95007 311 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 ATP5BP06576 529 aaKnown RBP14.03□□□□□ -0.16
POLR1B-209ENST00000448770 INSRRP14616 1297 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 RAG1P15918 1043 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 NCF2P19878 526 aaPredicted RBP14.03□□□□□ -0.16
POLR1B-209ENST00000448770 HARS2P49590 506 aaKnown RBP14.03□□□□□ -0.16
POLR1B-209ENST00000448770 ABCE1P61221 599 aaKnown RBP14.03□□□□□ -0.16
POLR1B-209ENST00000448770 CUL3Q13618 768 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 ITGA7Q13683 1181 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 VGLL4Q14135 290 aa14.03□□□□□ -0.16
POLR1B-209ENST00000448770 CFAP157Q5JU67 520 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms