RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 GINM1Q9NU53 330 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 ZNFX1Q9P2E3 1918 aaKnown RBP19.68■□□□□ 0.74
HMGA1-205ENST00000447654 APOEP02649 317 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 ENDOUP21128 410 aaKnown RBP19.68■□□□□ 0.74
HMGA1-205ENST00000447654 GABRB3P28472 473 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 CTBSQ01459 385 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 RNF169Q8NCN4 708 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 OR7G1Q8NGA0 311 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 HELQQ8TDG4 1101 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 CPT1BQ92523 772 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 MXRA8Q9BRK3 442 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 WDR83Q9BRX9 315 aaKnown RBP19.68■□□□□ 0.74
HMGA1-205ENST00000447654 TMEM117Q9H0C3 514 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 ANKMY1Q9P2S6 941 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 CPQQ9Y646 472 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 NOL3O60936 208 aaKnown RBP19.67■□□□□ 0.74
HMGA1-205ENST00000447654 BCAS2O75934 225 aaPredicted RBP19.67■□□□□ 0.74
HMGA1-205ENST00000447654 VAMP7P51809 220 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 MRPS5P82675 430 aaKnown RBP19.67■□□□□ 0.74
HMGA1-205ENST00000447654 MRPS9P82933 396 aaKnown RBP19.67■□□□□ 0.74
HMGA1-205ENST00000447654 IKBKEQ14164 716 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 MSS51Q4VC12 460 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 C16orf46Q6P387 395 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 XKR5Q6UX68 686 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 ZNF720Q7Z2F6 126 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 LILRB4Q8NHJ6 448 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 TMEM79Q9BSE2 394 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 KCNH7Q9NS40 1196 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 RAB20Q9NX57 234 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 IPO11Q9UI26 975 aaKnown RBP19.67■□□□□ 0.74
HMGA1-205ENST00000447654 HACL1Q9UJ83 578 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 SCN4AP35499 1836 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 TRIM49D1C9J1S8 452 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 DHX15O43143 795 aaKnown RBP19.67■□□□□ 0.74
HMGA1-205ENST00000447654 BANF1O75531 89 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 KRT75O95678 551 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 UNGP13051 313 aaPredicted RBP19.67■□□□□ 0.74
HMGA1-205ENST00000447654 ETS1P14921 441 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 DMPKQ09013 629 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 COG2Q14746 738 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 DGKDQ16760 1214 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 LRRC38Q5VT99 294 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 BNC2Q6ZN30 1099 aaPredicted RBP19.67■□□□□ 0.74
HMGA1-205ENST00000447654 LINC00299Q6ZSB3 139 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 ZNF677Q86XU0 584 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 MYCT1Q8N699 235 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 PDCD6IPQ8WUM4 868 aaKnown RBP19.67■□□□□ 0.74
HMGA1-205ENST00000447654 NACC2Q96BF6 587 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 KREMEN1Q96MU8 473 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 APOL6Q9BWW8 343 aa19.67■□□□□ 0.74
HMGA1-205ENST00000447654 MRPL47Q9HD33 250 aaKnown RBP19.67■□□□□ 0.74
HMGA1-205ENST00000447654 TCRBV9S1A1TA0A576 114 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 C7orf72A4D263 438 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 ZNF839A8K0R7 811 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 NOTOA8MTQ0 251 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 PROZP22891 400 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 IDH3AP50213 366 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 NLRP11P59045 1033 aaKnown RBP19.66■□□□□ 0.74
HMGA1-205ENST00000447654 PIGGQ5H8A4 983 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 PLEKHA7Q6IQ23 1121 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 SLC15A4Q8N697 577 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 UBR7Q8N806 425 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 SLITRK1Q96PX8 696 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 LXNQ9BS40 222 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 C20orf27Q9GZN8 174 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 SLC38A10Q9HBR0 1119 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 CDC14AQ9UNH5 594 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 SATB2Q9UPW6 733 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 BCS1LQ9Y276 419 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 GJA3Q9Y6H8 435 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 TTC34A8MYJ7 566 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 AREL1O15033 823 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 SLC22A2O15244 555 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 WEE2P0C1S8 567 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 KPNA1P52294 538 aaPredicted RBP19.66■□□□□ 0.74
HMGA1-205ENST00000447654 TAS2R40P59535 323 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 SPP2Q13103 211 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 ITGADQ13349 1161 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 PPP1R2P3Q6NXS1 205 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 C12orf56Q8IXR9 622 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 CADM3Q8N126 398 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 SLC35B2Q8TB61 432 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 ATP2A3Q93084 1043 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 ZNF347Q96SE7 839 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 DNAJC16Q9Y2G8 782 aa19.66■□□□□ 0.74
HMGA1-205ENST00000447654 PEX3P56589 373 aa19.65■□□□□ 0.74
HMGA1-205ENST00000447654 AARS2Q5JTZ9 985 aaKnown RBP19.65■□□□□ 0.74
HMGA1-205ENST00000447654 LIN9Q5TKA1 542 aa19.65■□□□□ 0.74
HMGA1-205ENST00000447654 AGMOQ6ZNB7 445 aa19.65■□□□□ 0.74
HMGA1-205ENST00000447654 SIX6OS1Q8N1H7 587 aa19.65■□□□□ 0.74
HMGA1-205ENST00000447654 SYTL5Q8TDW5 730 aaPredicted RBP19.65■□□□□ 0.74
HMGA1-205ENST00000447654 HPS1Q92902 700 aa19.65■□□□□ 0.74
HMGA1-205ENST00000447654 MED30Q96HR3 178 aa19.65■□□□□ 0.74
HMGA1-205ENST00000447654 SH2D3AQ9BRG2 576 aa19.65■□□□□ 0.74
HMGA1-205ENST00000447654 NPLQ9BXD5 320 aaPredicted RBP19.65■□□□□ 0.74
HMGA1-205ENST00000447654 CEP44Q9C0F1 390 aa19.65■□□□□ 0.74
HMGA1-205ENST00000447654 KLHL25Q9H0H3 589 aa19.65■□□□□ 0.74
HMGA1-205ENST00000447654 DAPK2Q9UIK4 370 aa19.65■□□□□ 0.74
HMGA1-205ENST00000447654 PRELID1Q9Y255 219 aa19.65■□□□□ 0.74
HMGA1-205ENST00000447654 A0A1W2PPW3 197 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms