RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 I3L4J1 428 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 DDX39AO00148 427 aaKnown RBP5.45□□□□□ -1.54
SDCBP-205ENST00000447267 ZNF213O14771 459 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 ABLIM3O94929 683 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 LDLRP01130 860 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 GNAI3P08754 354 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 CD99P14209 185 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 PFKLP17858 780 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 TKTP29401 623 aaKnown RBP5.45□□□□□ -1.54
SDCBP-205ENST00000447267 WASP42768 502 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 KCNAB2Q13303 367 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 GPATCH4Q5T3I0 446 aaKnown RBP5.45□□□□□ -1.54
SDCBP-205ENST00000447267 LIPIQ6XZB0 460 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 Q71RC1 249 aaPredicted RBP5.45□□□□□ -1.54
SDCBP-205ENST00000447267 GAREM2Q75VX8 874 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 TIPARPQ7Z3E1 657 aaKnown RBP5.45□□□□□ -1.54
SDCBP-205ENST00000447267 B3GNT8Q7Z7M8 397 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 HEATR4Q86WZ0 1026 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 CCDC60Q8IWA6 550 aaPredicted RBP5.45□□□□□ -1.54
SDCBP-205ENST00000447267 TCEAL8Q8IYN2 117 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 GSTCDQ8NEC7 633 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 DNASE2BQ8WZ79 361 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 TSPAN17Q96FV3 270 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 SLC46A1Q96NT5 459 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 SPATA25Q9BR10 227 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 EIF2AQ9BY44 585 aaKnown RBP5.45□□□□□ -1.54
SDCBP-205ENST00000447267 LRRCC1Q9C099 1032 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 ECT2Q9H8V3 914 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 TOMM22Q9NS69 142 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 EIF2B4Q9UI10 523 aaKnown RBP5.45□□□□□ -1.54
SDCBP-205ENST00000447267 ERRFI1Q9UJM3 462 aaPredicted RBP5.45□□□□□ -1.54
SDCBP-205ENST00000447267 SATB2Q9UPW6 733 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 ANKRD6Q9Y2G4 727 aa5.45□□□□□ -1.54
SDCBP-205ENST00000447267 IGKV6D-21A0A0A0MT36 114 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 E2F8A0AVK6 867 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 GPAA1O43292 621 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 NOBOXO60393 691 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 PPM1BO75688 479 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 CCNE2O96020 404 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 SFPQP23246 707 aaKnown RBP eCLIP5.44□□□□□ -1.54
SDCBP-205ENST00000447267 AKAP5P24588 427 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 TMOD1P28289 359 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 RBMS1P29558 406 aaKnown RBP5.44□□□□□ -1.54
SDCBP-205ENST00000447267 HOXA11P31270 313 aaPredicted RBP5.44□□□□□ -1.54
SDCBP-205ENST00000447267 CCT8P50990 548 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 POLE2P56282 527 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 MTMR1Q13613 665 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 MORC3Q14149 939 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 TARBP2Q15633 366 aaKnown RBP5.44□□□□□ -1.54
SDCBP-205ENST00000447267 PPP2R5EQ16537 467 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 C3orf38Q5JPI3 329 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 DCAF12L1Q5VU92 463 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 USP17L6PQ6QN14 398 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 CSPG4Q6UVK1 2322 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 ABHD15Q6UXT9 468 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 RSRC2Q7L4I2 434 aaKnown RBP5.44□□□□□ -1.54
SDCBP-205ENST00000447267 ADAT2Q7Z6V5 191 aaKnown RBP5.44□□□□□ -1.54
SDCBP-205ENST00000447267 XYLT1Q86Y38 959 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 LZTR1Q8N653 840 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 OR6P1Q8NGX9 317 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 CPT1CQ8TCG5 803 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 PLEKHO2Q8TD55 490 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 RFFLQ8WZ73 363 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 MRRFQ96E11 262 aaKnown RBP5.44□□□□□ -1.54
SDCBP-205ENST00000447267 GPR174Q9BXC1 333 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 SLC46A2Q9BY10 475 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 RNF38Q9H0F5 515 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 OSBPL2Q9H1P3 480 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 ZNF302Q9NR11 478 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 NOB1Q9ULX3 412 aaKnown RBP5.44□□□□□ -1.54
SDCBP-205ENST00000447267 EMC9Q9Y3B6 208 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 IPPQ9Y573 584 aa5.44□□□□□ -1.54
SDCBP-205ENST00000447267 A0A1W2PQJ5 194 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 SH3D21A4FU49 640 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 TMEM200CA6NKL6 621 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 MAGEB2O15479 319 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 TBX1O43435 398 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 CSO75390 466 aaKnown RBP5.43□□□□□ -1.54
SDCBP-205ENST00000447267 GNAI2P04899 355 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 PARP1P09874 1014 aaKnown RBP5.43□□□□□ -1.54
SDCBP-205ENST00000447267 NCAM1P13591 858 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 OPRD1P41143 372 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 TNFSF9P41273 254 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 SLC6A11P48066 632 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 SEPHS1P49903 392 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 SLC26A2P50443 739 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 DUSP3P51452 185 aaPredicted RBP5.43□□□□□ -1.54
SDCBP-205ENST00000447267 MRPS21P82921 87 aaKnown RBP5.43□□□□□ -1.54
SDCBP-205ENST00000447267 SART3Q15020 963 aaKnown RBP5.43□□□□□ -1.54
SDCBP-205ENST00000447267 INF2Q27J81 1249 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 EOGTQ5NDL2 527 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 FAM160B1Q5W0V3 765 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 VHLLQ6RSH7 139 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 VASH2Q86V25 355 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 ENAHQ8N8S7 591 aaPredicted RBP5.43□□□□□ -1.54
SDCBP-205ENST00000447267 GLIS1Q8NBF1 620 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 LEMD2Q8NC56 503 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 NSUN7Q8NE18 718 aaKnown RBP5.43□□□□□ -1.54
SDCBP-205ENST00000447267 SSH3Q8TE77 659 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 ALG3Q92685 438 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms