RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 HTR3DQ70Z44 454 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 NLRC3Q7RTR2 1065 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 ZNF410Q86VK4 478 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 KBTBD2Q8IY47 623 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 KBTBD3Q8NAB2 608 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 C11orf65Q8NCR3 313 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 C7orf34Q96L11 122 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 CCDC43Q96MW1 224 aaKnown RBP8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 TRIT1Q9H3H1 467 aaKnown RBP8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 SUV39H2Q9H5I1 410 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 CCDC134Q9H6E4 229 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 KANSL2Q9H9L4 492 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 RASSF1Q9NS23 344 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 ZDHHC7Q9NXF8 308 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 KCNH4Q9UQ05 1017 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 CLUHO75153 1309 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 ST20-MTHFSA0A0A6YYL1 179 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 A8MU76 341 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 CLDN3O15551 220 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 SLITRK5O94991 958 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 GOSR1O95249 250 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 ADH1CP00326 375 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 CHRM5P08912 532 aaPredicted RBP8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 HK1P19367 917 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 PDIA3P30101 505 aaKnown RBP8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 EPHB1P54762 984 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 CDK16Q00536 496 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 PCDH1Q08174 1060 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 MAP2K5Q13163 448 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 TFDP1Q14186 410 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 TRIM25Q14258 630 aaKnown RBP8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 GALNT3Q14435 633 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 CLCA4Q14CN2 919 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 OXA1LQ15070 435 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 TRIM16LQ309B1 348 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 NFRKBQ6P4R8 1299 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 SCFD1Q8WVM8 642 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 PSPC1Q8WXF1 523 aaKnown RBP8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 KCTD13Q8WZ19 329 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 SYN2Q92777 582 aaPredicted RBP8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 PHACTR3Q96KR7 559 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 MMS19Q96T76 1030 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 MYD88Q99836 296 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 ECSITQ9BQ95 431 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 CDK19Q9BWU1 502 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 CDADC1Q9BWV3 514 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 DDX47Q9H0S4 455 aaKnown RBP8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 LZTFL1Q9NQ48 299 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 AGPAT3Q9NRZ7 376 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 NKIRAS2Q9NYR9 191 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 PRKAG3Q9UGI9 489 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 ZC3H13Q5T200 1668 aaKnown RBP8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 LAMC1P11047 1609 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 KIAA0232Q92628 1395 aa8.87□□□□□ -0.99
MCF2L2-203ENST00000447025 ADGRB3O60242 1522 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 EFCAB10A6NFE3 127 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 HSBP1L1C9JCN9 74 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 ERVH48-1M5A8F1 160 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 PGRMC1O00264 195 aaKnown RBP8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 PLK4O00444 970 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 BACH1O14867 736 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 SNX3O60493 162 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 HBQ1P09105 142 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 QDPRP09417 244 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 SRCP12931 536 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 GJA1P17302 382 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 CDH2P19022 906 aaPredicted RBP8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 GSTM5P46439 218 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 HNMTP50135 292 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 TPTEP56180 551 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 LIPEQ05469 1076 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 DSC1Q08554 894 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 CAPRIN1Q14444 709 aaKnown RBP8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 MORF4L2Q15014 288 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 TARBP2Q15633 366 aaKnown RBP8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 RTN1Q16799 776 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 SLC45A4Q5BKX6 768 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 PITRM1Q5JRX3 1037 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 SAPCD1Q5SSQ6 148 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 KRT73Q86Y46 540 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 ZSCAN1Q8NBB4 408 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 OR5H6Q8NGV6 325 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 WDR48Q8TAF3 677 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 DEPDC1BQ8WUY9 529 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 GTF3AQ92664 365 aaKnown RBP8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 TEKT5Q96M29 485 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 PLEKHF1Q96S99 279 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 MROQ9BYG7 248 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 ANKRD2Q9GZV1 360 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 CCDC86Q9H6F5 360 aaKnown RBP8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 NRBP2Q9NSY0 501 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 C20orf96Q9NUD7 363 aaPredicted RBP8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 INTS10Q9NVR2 710 aaKnown RBP8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 FANCLQ9NW38 375 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 SRP68Q9UHB9 627 aaKnown RBP8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 GDAQ9Y2T3 454 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 PRELID3BQ9Y3B1 194 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 PCDHA3Q9Y5H8 950 aa8.86□□□□□ -0.99
MCF2L2-203ENST00000447025 PIK3C2BO00750 1634 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms