RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 SMAD3P84022 425 aaKnown RBP18.23■□□□□ 0.51
ATG9A-215ENST00000446716 ABHD15Q6UXT9 468 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 DENND1CQ8IV53 801 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 MSL3Q8N5Y2 521 aaKnown RBP18.23■□□□□ 0.51
ATG9A-215ENST00000446716 LRRC52Q8N7C0 313 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 SPATA20Q8TB22 786 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 EPS8L1Q8TE68 723 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 TDRKHQ9Y2W6 561 aaKnown RBP18.23■□□□□ 0.51
ATG9A-215ENST00000446716 PTCH2Q9Y6C5 1203 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 MRC1P22897 1456 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 EIF3HO15372 352 aaKnown RBP eCLIP18.23■□□□□ 0.51
ATG9A-215ENST00000446716 VAPBO95292 243 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 OCA2Q04671 838 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 C15orf59Q2T9L4 293 aaPredicted RBP18.23■□□□□ 0.51
ATG9A-215ENST00000446716 PLPP4Q5VZY2 271 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 ANKS6Q68DC2 871 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 NYAP1Q6ZVC0 841 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 ZSWIM2Q8NEG5 633 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 OR5B17Q8NGF7 314 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 MED8Q96G25 268 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 PIH1D1Q9NWS0 290 aaKnown RBP18.23■□□□□ 0.51
ATG9A-215ENST00000446716 PCDHA3Q9Y5H8 950 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 ASTN1O14525 1302 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 SNRPD1P62314 119 aaKnown RBP18.23■□□□□ 0.51
ATG9A-215ENST00000446716 BMPR2Q13873 1038 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 IRAK1BP1Q5VVH5 260 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 TBL1YQ9BQ87 522 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 EIF2AQ9BY44 585 aaKnown RBP18.23■□□□□ 0.51
ATG9A-215ENST00000446716 RAD54BQ9Y620 910 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 KRT87PA6NCN2 255 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 GUCA1CO95843 209 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 FGBP02675 491 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 PYGMP11217 842 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 CTSEP14091 401 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 HPGDP15428 266 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 SDHAF4Q5VUM1 108 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 ZNF470Q6ECI4 717 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 SLC24A5Q71RS6 500 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 SH3RF1Q7Z6J0 888 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 KCNMB4Q86W47 210 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 RMND5AQ9H871 391 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 RGS18Q9NS28 235 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 TAS2R13Q9NYV9 303 aa18.23■□□□□ 0.51
ATG9A-215ENST00000446716 SEC24DO94855 1032 aaPredicted RBP18.22■□□□□ 0.51
ATG9A-215ENST00000446716 MGAT1P26572 445 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 POLE2P56282 527 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 MCOLN3Q8TDD5 553 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 AHCYL2Q96HN2 611 aaKnown RBP18.22■□□□□ 0.51
ATG9A-215ENST00000446716 PANX3Q96QZ0 392 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 TLE6Q9H808 572 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 SPATA31C1P0DKV0 1188 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 OVGP1Q12889 678 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 XRCC4Q13426 336 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 ADNPQ9H2P0 1102 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 BTBD7Q9P203 1132 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 SIGLEC16A6NMB1 481 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 APOC4-APOC2K7ER74 178 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 CCNT2O60583 730 aaKnown RBP18.22■□□□□ 0.51
ATG9A-215ENST00000446716 NDUFS2O75306 463 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 APOC2P02655 101 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 ELK3P41970 407 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 DDR2Q16832 855 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 OTOP2Q7RTS6 562 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 SLC9A9Q8IVB4 645 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 ZFP42Q96MM3 310 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 APPL1Q9UKG1 709 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 LYPLA2O95372 231 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 RPN2P04844 631 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 CHI3L1P36222 383 aaPredicted RBP18.22■□□□□ 0.51
ATG9A-215ENST00000446716 GLUD2P49448 558 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 CCNG1P51959 295 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 DMTNQ08495 405 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 C10orf53Q8N6V4 93 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 B4GALNT2Q8NHY0 566 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 EME1Q96AY2 570 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 MAML3Q96JK9 1138 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 ACOX2Q99424 681 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 AKAP7Q9P0M2 348 aaPredicted RBP18.22■□□□□ 0.51
ATG9A-215ENST00000446716 V9GYQ6 96 aa18.22■□□□□ 0.51
ATG9A-215ENST00000446716 SEPT4O43236 478 aa18.21■□□□□ 0.51
ATG9A-215ENST00000446716 FGRP09769 529 aa18.21■□□□□ 0.51
ATG9A-215ENST00000446716 CPA3P15088 417 aa18.21■□□□□ 0.51
ATG9A-215ENST00000446716 TRAPPC5Q8IUR0 188 aa18.21■□□□□ 0.51
ATG9A-215ENST00000446716 AGGF1Q8N302 714 aaeCLIP18.21■□□□□ 0.51
ATG9A-215ENST00000446716 MDM1Q8TC05 714 aa18.21■□□□□ 0.51
ATG9A-215ENST00000446716 DTX3LQ8TDB6 740 aa18.21■□□□□ 0.51
ATG9A-215ENST00000446716 BCL9LQ86UU0 1499 aa18.21■□□□□ 0.51
ATG9A-215ENST00000446716 LOC102724159A0A0B4J2E5 919 aa18.21■□□□□ 0.51
ATG9A-215ENST00000446716 PARNO95453 639 aaKnown RBP18.21■□□□□ 0.51
ATG9A-215ENST00000446716 KRT6AP02538 564 aa18.21■□□□□ 0.51
ATG9A-215ENST00000446716 KRT6BP04259 564 aa18.21■□□□□ 0.51
ATG9A-215ENST00000446716 LSP1P33241 339 aa18.21■□□□□ 0.51
ATG9A-215ENST00000446716 GP5P40197 560 aa18.21■□□□□ 0.51
ATG9A-215ENST00000446716 KRT6CP48668 564 aa18.21■□□□□ 0.51
ATG9A-215ENST00000446716 PWP2Q15269 919 aaKnown RBP18.21■□□□□ 0.51
ATG9A-215ENST00000446716 FAM183BPQ6ZVS7 135 aa18.21■□□□□ 0.51
ATG9A-215ENST00000446716 LRRC8DQ7L1W4 858 aa18.21■□□□□ 0.51
ATG9A-215ENST00000446716 GAS2L1Q99501 681 aaPredicted RBP18.21■□□□□ 0.51
ATG9A-215ENST00000446716 SLC24A2Q9UI40 661 aa18.21■□□□□ 0.51
ATG9A-215ENST00000446716 WDR27A2RRH5 827 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms