RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 MOB2Q70IA6 237 aa19.47■□□□□ 0.71
PMPCB-204ENST00000444457 KBTBD6Q86V97 674 aa19.47■□□□□ 0.71
PMPCB-204ENST00000444457 IFNLR1Q8IU57 520 aaPredicted RBP19.47■□□□□ 0.71
PMPCB-204ENST00000444457 CEP70Q8NHQ1 597 aa19.47■□□□□ 0.71
PMPCB-204ENST00000444457 SNRNP27Q8WVK2 155 aaKnown RBP19.47■□□□□ 0.71
PMPCB-204ENST00000444457 DCUN1D1Q96GG9 259 aa19.47■□□□□ 0.71
PMPCB-204ENST00000444457 ASNSD1Q9NWL6 643 aa19.47■□□□□ 0.71
PMPCB-204ENST00000444457 ITGA11Q9UKX5 1188 aa19.47■□□□□ 0.71
PMPCB-204ENST00000444457 PAIP2BQ9ULR5 123 aaKnown RBP19.47■□□□□ 0.71
PMPCB-204ENST00000444457 RAB26Q9ULW5 256 aa19.47■□□□□ 0.71
PMPCB-204ENST00000444457 TCRBV7S3A2A0A539 114 aa19.47■□□□□ 0.71
PMPCB-204ENST00000444457 VARSP26640 1264 aaKnown RBP19.47■□□□□ 0.71
PMPCB-204ENST00000444457 ALDH1A3P47895 512 aa19.47■□□□□ 0.71
PMPCB-204ENST00000444457 CREB5Q02930 508 aa19.47■□□□□ 0.71
PMPCB-204ENST00000444457 TUBB3Q13509 450 aa19.47■□□□□ 0.71
PMPCB-204ENST00000444457 TAB3Q8N5C8 712 aaPredicted RBP19.47■□□□□ 0.71
PMPCB-204ENST00000444457 HPDLQ96IR7 371 aa19.47■□□□□ 0.71
PMPCB-204ENST00000444457 HEXIM2Q96MH2 286 aaKnown RBP19.47■□□□□ 0.71
PMPCB-204ENST00000444457 PEBP4Q96S96 227 aa19.47■□□□□ 0.71
PMPCB-204ENST00000444457 SLX1AQ9BQ83 275 aa19.47■□□□□ 0.71
PMPCB-204ENST00000444457 CALN1Q9BXU9 219 aa19.47■□□□□ 0.71
PMPCB-204ENST00000444457 PLXNA1Q9UIW2 1896 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 MCF2LO15068 1137 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 LGALS2P05162 132 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 ZNF143P52747 638 aaPredicted RBP19.46■□□□□ 0.71
PMPCB-204ENST00000444457 COPAP53621 1224 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 MRPS5P82675 430 aaKnown RBP19.46■□□□□ 0.71
PMPCB-204ENST00000444457 ARHGAP1Q07960 439 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 KRT81Q14533 505 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 TMEM132DQ14C87 1099 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 RABGAP1LQ5R372 815 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 TTC39BQ5VTQ0 682 aaPredicted RBP19.46■□□□□ 0.71
PMPCB-204ENST00000444457 ZNF410Q86VK4 478 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 IGDCC3Q8IVU1 814 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 CCDC33Q8N5R6 958 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 LINC01465Q8N7H1 131 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 FAM71DQ8N9W8 422 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 UBA3Q8TBC4 463 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 DDI1Q8WTU0 396 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 SIKE1Q9BRV8 207 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 C20orf27Q9GZN8 174 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 MROH8Q9H579 483 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 RSAD1Q9HA92 442 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 FAIMQ9NVQ4 179 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 THEGQ9P2T0 379 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 AKT3Q9Y243 479 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 CCDC195A0A1B0GUA6 201 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 RBP3P10745 1247 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 ARF4P18085 180 aaPredicted RBP19.46■□□□□ 0.71
PMPCB-204ENST00000444457 MYBPC1Q00872 1141 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 MTM1Q13496 603 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 GJC2Q5T442 439 aaPredicted RBP19.46■□□□□ 0.71
PMPCB-204ENST00000444457 MAP1SQ66K74 1059 aaPredicted RBP19.46■□□□□ 0.71
PMPCB-204ENST00000444457 TRIM67Q6ZTA4 783 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 DPH6Q7L8W6 267 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 RSPH1Q8WYR4 309 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 CCDC124Q96CT7 223 aaKnown RBP19.46■□□□□ 0.71
PMPCB-204ENST00000444457 MKS1Q9NXB0 559 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 TUBGCP4Q9UGJ1 667 aa19.46■□□□□ 0.71
PMPCB-204ENST00000444457 BARX2Q9UMQ3 279 aaPredicted RBP19.46■□□□□ 0.71
PMPCB-204ENST00000444457 ASB14A6NK59 587 aa19.45■□□□□ 0.7
PMPCB-204ENST00000444457 TRIM49D1C9J1S8 452 aa19.45■□□□□ 0.7
PMPCB-204ENST00000444457 OSBPP22059 807 aa19.45■□□□□ 0.7
PMPCB-204ENST00000444457 INCA1Q0VD86 236 aa19.45■□□□□ 0.7
PMPCB-204ENST00000444457 PPIL2Q13356 520 aa19.45■□□□□ 0.7
PMPCB-204ENST00000444457 MPP3Q13368 585 aa19.45■□□□□ 0.7
PMPCB-204ENST00000444457 ARMCX2Q7L311 632 aa19.45■□□□□ 0.7
PMPCB-204ENST00000444457 NUDCD3Q8IVD9 361 aa19.45■□□□□ 0.7
PMPCB-204ENST00000444457 SMYD1Q8NB12 490 aa19.45■□□□□ 0.7
PMPCB-204ENST00000444457 SPATA18Q8TC71 538 aa19.45■□□□□ 0.7
PMPCB-204ENST00000444457 USP6NLQ92738 828 aa19.45■□□□□ 0.7
PMPCB-204ENST00000444457 C6orf203Q9P0P8 240 aaPredicted RBP19.45■□□□□ 0.7
PMPCB-204ENST00000444457 XPO7Q9UIA9 1087 aaKnown RBP19.45■□□□□ 0.7
PMPCB-204ENST00000444457 PCDHGB4Q9UN71 923 aa19.45■□□□□ 0.7
PMPCB-204ENST00000444457 PCDHGB5Q9Y5G0 923 aa19.45■□□□□ 0.7
PMPCB-204ENST00000444457 TRIP11Q15643 1979 aa19.45■□□□□ 0.7
PMPCB-204ENST00000444457 E9PBE3 544 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 ENDOD1O94919 500 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 KLHL2O95198 593 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 VTNP04004 478 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 ATP6V1B1P15313 513 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 CYP3A5P20815 502 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 GPD1P21695 349 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 ELK3P41970 407 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 NDST1P52848 882 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 BASP1P80723 227 aaKnown RBP19.44■□□□□ 0.7
PMPCB-204ENST00000444457 PPIDQ08752 370 aaKnown RBP19.44■□□□□ 0.7
PMPCB-204ENST00000444457 MMRN1Q13201 1228 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 LPIN1Q14693 890 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 SH3PXD2AQ5TCZ1 1133 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 TRNP1Q6NT89 227 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 CYP4V2Q6ZWL3 525 aaPredicted RBP19.44■□□□□ 0.7
PMPCB-204ENST00000444457 BBS5Q8N3I7 341 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 MRPL1Q9BYD6 325 aaKnown RBP19.44■□□□□ 0.7
PMPCB-204ENST00000444457 C2CD4BA6NLJ0 364 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 KBTBD13C9JR72 458 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 SPAG6O75602 509 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 PROCP04070 461 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 IDO1P14902 403 aa19.44■□□□□ 0.7
PMPCB-204ENST00000444457 CDH2P19022 906 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms