RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 TRIM14Q14142 442 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 PPM1JQ5JR12 505 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 MIIPQ5JXC2 388 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 STPG1Q5TH74 334 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 NUGGCQ68CJ6 796 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 KIAA1211LQ6NV74 962 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 KIAA1324Q6UXG2 1013 aaKnown RBP9.11□□□□□ -0.95
USP6NL-203ENST00000443016 APTXQ7Z2E3 356 aaKnown RBP9.11□□□□□ -0.95
USP6NL-203ENST00000443016 SCML4Q8N228 414 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 CLEC4CQ8WTT0 213 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 EDEM2Q9BV94 578 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 APEX2Q9UBZ4 518 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 FBXO10Q9UK96 956 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 HCN2Q9UL51 889 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 STON1Q9Y6Q2 735 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 TYW5A2RUC4 315 aaKnown RBP9.1□□□□□ -0.95
USP6NL-203ENST00000443016 GFRA2O00451 464 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 NPC1O15118 1278 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 NDUFV2P19404 249 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 SLC9A1P19634 815 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 PTGER3P43115 390 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 GPD2P43304 727 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 ACADSBP45954 432 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 CCDC173Q0VFZ6 552 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 EIF4HQ15056 248 aaKnown RBP9.1□□□□□ -0.95
USP6NL-203ENST00000443016 MAP7D1Q3KQU3 841 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 LYSMD4Q5XG99 296 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 GJB7Q6PEY0 223 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 SERPINA13PQ6UXR4 307 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 SLC36A4Q6YBV0 504 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 ZNF606Q8WXB4 792 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 P2RY11Q96G91 374 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 GABRG3Q99928 467 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 TRIM62Q9BVG3 475 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 SLC2A11Q9BYW1 496 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 CAPN10Q9HC96 672 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 ACP6Q9NPH0 428 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 ELOVL2Q9NXB9 296 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 CYP8B1Q9UNU6 501 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 PLA2G4CQ9UP65 541 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 EML5Q05BV3 1969 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 THADAQ6YHU6 1953 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 LNP1A1A4G5 178 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 GYS2P54840 703 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 NR1I3Q14994 352 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 CCDC117Q8IWD4 279 aaPredicted RBP9.1□□□□□ -0.95
USP6NL-203ENST00000443016 DEFB119Q8N690 84 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 ADAM32Q8TC27 787 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 SERPINB11Q96P15 392 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 ERGIC2Q96RQ1 377 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 CLEC4EQ9ULY5 219 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 CNTN6Q9UQ52 1028 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.1□□□□□ -0.95
USP6NL-203ENST00000443016 ITIH6Q6UXX5 1313 aa9.1□□□□□ -0.95
USP6NL-203ENST00000443016 PATE3B3GLJ2 98 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 TIMM44O43615 452 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 NDUFS2O75306 463 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 GABBR2O75899 941 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 LATS1O95835 1130 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 MOCS2O96007 188 aaPredicted RBP9.09□□□□□ -0.95
USP6NL-203ENST00000443016 CFIP05156 583 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 EPHX1P07099 455 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 HOXD9P28356 352 aaPredicted RBP9.09□□□□□ -0.95
USP6NL-203ENST00000443016 IL12RB1P42701 662 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 LIMK1P53667 647 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 APBA1Q02410 837 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 DSG2Q14126 1118 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 TRIM61Q5EBN2 209 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 SPDYCQ5MJ68 293 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 DAB2IPQ5VWQ8 1189 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 SPECC1LQ69YQ0 1117 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 MSANTD2Q6P1R3 559 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 DENND1BQ6P3S1 775 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 RFWD3Q6PCD5 774 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 TMC6Q7Z403 805 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 CACUL1Q86Y37 369 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 SYT12Q8IV01 421 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 VSTM4Q8IW00 320 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 SORCS1Q8WY21 1168 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 PIWIL1Q96J94 861 aaKnown RBP9.09□□□□□ -0.95
USP6NL-203ENST00000443016 MRGPRX1Q96LB2 322 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 NUP58Q9BVL2 599 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 NUSAP1Q9BXS6 441 aaKnown RBP9.09□□□□□ -0.95
USP6NL-203ENST00000443016 SLC6A17Q9H1V8 727 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 ABCB8Q9NUT2 735 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 THAP10Q9P2Z0 257 aaPredicted RBP9.09□□□□□ -0.95
USP6NL-203ENST00000443016 MBD1Q9UIS9 605 aaPredicted RBP9.09□□□□□ -0.95
USP6NL-203ENST00000443016 NAALADL1Q9UQQ1 740 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 DAAM1Q9Y4D1 1078 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 KIAA1549LQ6ZVL6 1849 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 C4orf47A7E2U8 309 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 E5RJQ4 531 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 ACADMP11310 421 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 ITPKAP23677 461 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 KRT9P35527 623 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 DPP6P42658 865 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 ATXN3P54252 364 aaPredicted RBP9.09□□□□□ -0.95
USP6NL-203ENST00000443016 PTK2Q05397 1052 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 RING1Q06587 406 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 ZNF33AQ06730 810 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms