RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 FBRSQ9HAH7 460 aa7.59□□□□□ -1.19
SSXP3-201ENST00000442971 CCM2LQ9NUG4 571 aaPredicted RBP7.59□□□□□ -1.19
SSXP3-201ENST00000442971 FBXL12Q9NXK8 326 aa7.59□□□□□ -1.19
SSXP3-201ENST00000442971 MARK1Q9P0L2 795 aa7.59□□□□□ -1.19
SSXP3-201ENST00000442971 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.59□□□□□ -1.19
SSXP3-201ENST00000442971 A0A1B0GUH1 482 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 SLC12A8A0AV02 714 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 ZNF840PA6NDX5 716 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 SERINC4A6NH21 518 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 ZBTB39O15060 712 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 LATO43561 262 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 LY6G6DO95868 133 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 ABL1P00519 1130 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 OAS1P00973 400 aaKnown RBP7.58□□□□□ -1.2
SSXP3-201ENST00000442971 CYP11A1P05108 521 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 CHMLP26374 656 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 LRPAP1P30533 357 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 PDLIM3Q53GG5 364 aaPredicted RBP7.58□□□□□ -1.2
SSXP3-201ENST00000442971 PPP4R3AQ6IN85 833 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 CEP97Q8IW35 865 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 CISD2Q8N5K1 135 aaKnown RBP7.58□□□□□ -1.2
SSXP3-201ENST00000442971 SORCS1Q8WY21 1168 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 TARS2Q9BW92 718 aaKnown RBP7.58□□□□□ -1.2
SSXP3-201ENST00000442971 NEUROG2Q9H2A3 272 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 ELOVL2Q9NXB9 296 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 SERGEFQ9UGK8 458 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 FBXO10Q9UK96 956 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 PCDHA12Q9UN75 941 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 SLC27A6Q9Y2P4 619 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 MGAM2Q2M2H8 2515 aa7.58□□□□□ -1.2
SSXP3-201ENST00000442971 LOC101059948A0A1B0GTJ6 334 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 EML1O00423 815 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 DNAJB5O75953 348 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 ABL2P42684 1182 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 MFAP3P55082 362 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 LILRA4P59901 499 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 CCL7P80098 99 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 PPP2R2BQ00005 443 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 ZFP36L1Q07352 338 aaKnown RBP7.57□□□□□ -1.2
SSXP3-201ENST00000442971 PTK2BQ14289 1009 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 NFE2Q16621 373 aaPredicted RBP7.57□□□□□ -1.2
SSXP3-201ENST00000442971 DEFB133Q30KQ1 61 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 ZNF776Q68DI1 518 aaPredicted RBP7.57□□□□□ -1.2
SSXP3-201ENST00000442971 SLC6A19Q695T7 634 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 C4orf19Q8IY42 314 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 FTSJ3Q8IY81 847 aaKnown RBP7.57□□□□□ -1.2
SSXP3-201ENST00000442971 UNC5BQ8IZJ1 945 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 IQCKQ8N0W5 287 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 ZNF366Q8N895 744 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 ST6GALNAC3Q8NDV1 305 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 GOLGA1Q92805 767 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 GLMNQ92990 594 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 PNPLA2Q96AD5 504 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 CCDC136Q96JN2 1154 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 FEM1CQ96JP0 617 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 CCDC113Q9H0I3 377 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 C2orf40Q9H1Z8 148 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 PABPC3Q9H361 631 aaKnown RBP7.57□□□□□ -1.2
SSXP3-201ENST00000442971 MRPL40Q9NQ50 206 aaKnown RBP7.57□□□□□ -1.2
SSXP3-201ENST00000442971 ARHGAP20Q9P2F6 1191 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 SCML1Q9UN30 329 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 POLHQ9Y253 713 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 TTC41PQ6P2S7 1318 aa7.57□□□□□ -1.2
SSXP3-201ENST00000442971 SONP18583 2426 aaKnown RBP7.56□□□□□ -1.2
SSXP3-201ENST00000442971 A0A1W2PQM1 296 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 INAFM1C9JVW0 142 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 DPM1O60762 260 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 DGAT1O75907 488 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 DDAH1O94760 285 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 RPLP0P05388 317 aaKnown RBP7.56□□□□□ -1.2
SSXP3-201ENST00000442971 CCL4P13236 92 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 RABIFP47224 123 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 PPP3CCP48454 512 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 HNRNPKP61978 463 aaKnown RBP eCLIP7.56□□□□□ -1.2
SSXP3-201ENST00000442971 CEBPEQ15744 281 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 ECM1Q16610 540 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 IMMTQ16891 758 aaKnown RBP7.56□□□□□ -1.2
SSXP3-201ENST00000442971 ZNF542PQ5EBM4 170 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 NT5DC1Q5TFE4 455 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 PRPF39Q86UA1 669 aaKnown RBP7.56□□□□□ -1.2
SSXP3-201ENST00000442971 METTL23Q86XA0 190 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 APLFQ8IW19 511 aaPredicted RBP7.56□□□□□ -1.2
SSXP3-201ENST00000442971 CCDC83Q8IWF9 413 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 PARP9Q8IXQ6 854 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 SLC35F3Q8IY50 421 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 ZNF654Q8IZM8 581 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 RBBP8NLQ8NC74 664 aaPredicted RBP7.56□□□□□ -1.2
SSXP3-201ENST00000442971 ZNF548Q8NEK5 533 aaPredicted RBP7.56□□□□□ -1.2
SSXP3-201ENST00000442971 BHMTQ93088 406 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 WBP2Q969T9 261 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 PMEPA1Q969W9 287 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 TAAR9Q96RI9 348 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 TCHPQ9BT92 498 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 SLC25A23Q9BV35 468 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 BOCQ9BWV1 1114 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 CIPCQ9C0C6 399 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 MRS2Q9HD23 443 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 ABCB6Q9NP58 842 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 MLXIPLQ9NP71 852 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 PRSS16Q9NQE7 514 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms