RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 MAML1Q92585 1016 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 ROPN1BQ9BZX4 212 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 PRO3102Q9H379 93 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 EBF3Q9H4W6 596 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 ROPN1Q9HAT0 212 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 MARCH2Q9P0N8 246 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 TSPAN16Q9UKR8 245 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 R3HDM2Q9Y2K5 976 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 TTLL3Q9Y4R7 772 aa7.64□□□□□ -1.19
CDC42BPA-208ENST00000442054 TTC3P53804 2025 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 GRAP2O75791 330 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 EDN1P05305 212 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 DGKEP52429 567 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 HLTFQ14527 1009 aaKnown RBP eCLIP7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 SOWAHAQ2M3V2 549 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 ITPRIPL2Q3MIP1 535 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 KIAA1324Q6UXG2 1013 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 CRELD2Q6UXH1 353 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 ADAT2Q7Z6V5 191 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 SMRP1Q8NCR6 262 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 UTP4Q969X6 686 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 RTP3Q9BQQ7 232 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 IRF2BPLQ9H1B7 796 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 CDC42EP4Q9H3Q1 356 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 RXFP1Q9HBX9 757 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 AVENQ9NQS1 362 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 DYRK4Q9NR20 520 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 ARHGEF4Q9NR80 690 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 CHST7Q9NS84 486 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 HAUS2Q9NVX0 235 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 GRID1Q9ULK0 1009 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 USP18Q9UMW8 372 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 IRAK3Q9Y616 596 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 ZNF236Q9UL36 1845 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 FOXO6A8MYZ6 492 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 H0Y626 953 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 CYP26A1O43174 497 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 OAZ2O95190 189 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 HAPLN1P10915 354 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 CCNB1P14635 433 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 NPR3P17342 541 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 WASP42768 502 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 ACADSBP45954 432 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 GPR15P49685 360 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 NUMBP49757 651 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 CCNG1P51959 295 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 ZNF252P-AS1Q0IIN9 211 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 BNIP1Q12981 228 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 E2F5Q15329 346 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 FAM102AQ5T9C2 384 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 FAM3CQ92520 227 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 FAM122AQ96E09 287 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 TMA16Q96EY4 203 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 NAP1L3Q99457 506 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 DCLK3Q9C098 648 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 PLK2Q9NYY3 685 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 UVRAGQ9P2Y5 699 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 DNMT3LQ9UJW3 386 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 TMEM221A6NGB7 291 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 M0R296 226 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 PIRO00625 290 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 ATG13O75143 517 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 ZNF132P52740 706 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 PLTPP55058 493 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 SEC13P55735 322 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 NCALDP61601 193 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 ADIGQ0VDE8 80 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 BST2Q10589 180 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 LPAL2Q16609 132 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 KRT71Q3SY84 523 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 C6orf118Q5T5N4 469 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 SLC8B1Q6J4K2 584 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 ACAD10Q6JQN1 1059 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 MICALCLQ6ZW33 695 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 TRMT10CQ7L0Y3 403 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 MZB1Q8WU39 189 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 TCEAL4Q96EI5 215 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 CYP2S1Q96SQ9 504 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 WDR83Q9BRX9 315 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 ULBP1Q9BZM6 244 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 ABCF3Q9NUQ8 709 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 DNMT3BQ9UBC3 853 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 GMEB2Q9UKD1 530 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 WNT6Q9Y6F9 365 aa7.63□□□□□ -1.19
CDC42BPA-208ENST00000442054 VNN1O95497 513 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 CEBPBP17676 345 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 GTF2A1P52655 376 aaPredicted RBP7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 CENPCQ03188 943 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 KDSRQ06136 332 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 ADCY2Q08462 1091 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 SLC44A4Q53GD3 710 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 RGS9BPQ6ZS82 235 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 PARP9Q8IXQ6 854 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 GSTCDQ8NEC7 633 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 CKAP2Q8WWK9 683 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 PRMT1Q99873 361 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 RHOBTB2Q9BYZ6 727 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 LMAN1LQ9HAT1 526 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 HEBP1Q9NRV9 189 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms