RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 VSTM1Q6UX27 236 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 DSTYKQ6XUX3 929 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 UNC45BQ8IWX7 931 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 SCUBE3Q8IX30 993 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 PQLC3Q8N755 202 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 CCDC197Q8NCU1 140 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 PCDH19Q8TAB3 1148 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 UHMK1Q8TAS1 419 aaKnown RBP9.44□□□□□ -0.9
HDAC6-209ENST00000440653 RSPH1Q8WYR4 309 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 WNT8BQ93098 351 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 GRAMD1AQ96CP6 724 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 PGAP3Q96FM1 320 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-209ENST00000440653 ZFP42Q96MM3 310 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 OLFM3Q96PB7 478 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 ZNF317Q96PQ6 595 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-209ENST00000440653 CSPG4P5Q96PW8 444 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 CYTH2Q99418 400 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 NPY6RQ99463 290 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 BRD8Q9H0E9 1235 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 CXCL16Q9H2A7 254 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 DHX35Q9H5Z1 703 aaKnown RBP9.44□□□□□ -0.9
HDAC6-209ENST00000440653 NSUN3Q9H649 340 aaKnown RBP9.44□□□□□ -0.9
HDAC6-209ENST00000440653 GOLGA2P5Q9HBQ8 144 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 LRRC4CQ9HCJ2 640 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 FZD10Q9ULW2 581 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.44□□□□□ -0.9
HDAC6-209ENST00000440653 USP3Q9Y6I4 520 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 ATG2AQ2TAZ0 1938 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 IQANK1A0A1B0GTG1 560 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 PIK3R2O00459 728 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 TM9SF1O15321 606 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 NCAM2O15394 837 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 MTSS1O43312 755 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 OPHN1O60890 802 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 GCATO75600 419 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 AP1G2O75843 785 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 BAIAP3O94812 1187 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 ZWINTO95229 277 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 F9P00740 461 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 PDGFRBP09619 1106 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 CTSHP09668 335 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 MLNP12872 115 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 ETS1P14921 441 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 KRT15P19012 456 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 TYMPP19971 482 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 LMO2P25791 158 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 RFC2P35250 354 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 TKTL1P51854 596 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 SEC24CP53992 1094 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 DAOAP59103 153 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 TSPY1Q01534 308 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 HYAL1Q12794 435 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 NAB1Q13506 487 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 SEMA5AQ13591 1074 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 SPARCL1Q14515 664 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 DSC3Q14574 896 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 CBX2Q14781 532 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-209ENST00000440653 PDK1Q15118 436 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 SKIDA1Q1XH10 827 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 ARL13BQ3SXY8 428 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 INTS6LQ5JSJ4 861 aaKnown RBP9.43□□□□□ -0.9
HDAC6-209ENST00000440653 RAB41Q5JT25 222 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 UBAP2Q5T6F2 1119 aaKnown RBP9.43□□□□□ -0.9
HDAC6-209ENST00000440653 SH3PXD2AQ5TCZ1 1133 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 WSCD1Q658N2 575 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 FOXR1Q6PIV2 292 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 RGS9BPQ6ZS82 235 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 CCDC121Q6ZUS5 278 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 ZC3H18Q86VM9 953 aaKnown RBP9.43□□□□□ -0.9
HDAC6-209ENST00000440653 SRRM1Q8IYB3 904 aaKnown RBP9.43□□□□□ -0.9
HDAC6-209ENST00000440653 OTUD6BQ8N6M0 293 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 GBP7Q8N8V2 638 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-209ENST00000440653 FBXO36Q8NEA4 188 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 RNF139Q8WU17 664 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 TFB1MQ8WVM0 346 aaKnown RBP9.43□□□□□ -0.9
HDAC6-209ENST00000440653 MAML1Q92585 1016 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 CABS1Q96KC9 395 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 MAGEB18Q96M61 343 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 KCTD15Q96SI1 283 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-209ENST00000440653 GAD1Q99259 594 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 PAFAH2Q99487 392 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 ACBD6Q9BR61 282 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 DHRS4Q9BTZ2 278 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 B3GNT5Q9BYG0 378 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 DMAP1Q9NPF5 467 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-209ENST00000440653 ETNK2Q9NVF9 386 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 CTNNAL1Q9UBT7 734 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 NAALADL1Q9UQQ1 740 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 NOD1Q9Y239 953 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 IKBKGQ9Y6K9 419 aa9.43□□□□□ -0.9
HDAC6-209ENST00000440653 A0A0A0MRY4 1105 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 A0A0U1RQF3 1178 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 TMEM189-UBE2V1I3L0A0 370 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 M0QZQ0 153 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 CAPN9O14815 690 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 GABBR2O75899 941 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 FAM155BO75949 473 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 ZIC2O95409 532 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-209ENST00000440653 CPP00450 1065 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 CHRNA1P02708 482 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms