RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 AHI1Q8N157 1196 aa14.23□□□□□ -0.13
LTBR-202ENST00000440421 GPR161Q8N6U8 529 aaKnown RBP14.23□□□□□ -0.13
LTBR-202ENST00000440421 ZNF397Q8NF99 534 aaPredicted RBP14.23□□□□□ -0.13
LTBR-202ENST00000440421 SLC30A5Q8TAD4 765 aa14.23□□□□□ -0.13
LTBR-202ENST00000440421 WFIKKN2Q8TEU8 576 aa14.23□□□□□ -0.13
LTBR-202ENST00000440421 LOXL4Q96JB6 756 aa14.23□□□□□ -0.13
LTBR-202ENST00000440421 SPACA7Q96KW9 195 aa14.23□□□□□ -0.13
LTBR-202ENST00000440421 IRX2Q9BZI1 471 aaPredicted RBP14.23□□□□□ -0.13
LTBR-202ENST00000440421 CD248Q9HCU0 757 aa14.23□□□□□ -0.13
LTBR-202ENST00000440421 RTN4Q9NQC3 1192 aaKnown RBP14.23□□□□□ -0.13
LTBR-202ENST00000440421 SEMA4GQ9NTN9 838 aa14.23□□□□□ -0.13
LTBR-202ENST00000440421 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.23□□□□□ -0.13
LTBR-202ENST00000440421 DMDP11532 3685 aa14.23□□□□□ -0.13
LTBR-202ENST00000440421 F5H5T6 163 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 NPC1O15118 1278 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 TIMM44O43615 452 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 LUC7L3O95232 432 aaKnown RBP14.22□□□□□ -0.13
LTBR-202ENST00000440421 CYP1A1P04798 512 aaPredicted RBP14.22□□□□□ -0.13
LTBR-202ENST00000440421 EPHX1P07099 455 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 LMAN2Q12907 356 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 CDH18Q13634 790 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 STARD3Q14849 445 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 IQCB1Q15051 598 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 MAP7D1Q3KQU3 841 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 FUT11Q495W5 492 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 FILIP1LQ4L180 1135 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 FNDC3BQ53EP0 1204 aaKnown RBP14.22□□□□□ -0.13
LTBR-202ENST00000440421 OTUD1Q5VV17 481 aaPredicted RBP14.22□□□□□ -0.13
LTBR-202ENST00000440421 PMS2CLQ68D20 193 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 MBLAC2Q68D91 279 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 RNF43Q68DV7 783 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 KIAA1324Q6UXG2 1013 aaKnown RBP14.22□□□□□ -0.13
LTBR-202ENST00000440421 C11orf74Q86VG3 221 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 CIR1Q86X95 450 aaPredicted RBP14.22□□□□□ -0.13
LTBR-202ENST00000440421 CCDC117Q8IWD4 279 aaPredicted RBP14.22□□□□□ -0.13
LTBR-202ENST00000440421 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.22□□□□□ -0.13
LTBR-202ENST00000440421 MRGPRX1Q96LB2 322 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 PCDHB18PQ96TA0 734 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 NPY6RQ99463 290 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 ADAM33Q9BZ11 813 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 SEPT11Q9NVA2 429 aaKnown RBP14.22□□□□□ -0.13
LTBR-202ENST00000440421 MBD1Q9UIS9 605 aaPredicted RBP14.22□□□□□ -0.13
LTBR-202ENST00000440421 STAP1Q9ULZ2 295 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.22□□□□□ -0.13
LTBR-202ENST00000440421 SPAG17Q6Q759 2223 aa14.22□□□□□ -0.13
LTBR-202ENST00000440421 H0Y626 953 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 SYNCRIPO60506 623 aaKnown RBP14.21□□□□□ -0.13
LTBR-202ENST00000440421 HLA-EP13747 358 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 POLR2EP19388 210 aaKnown RBP14.21□□□□□ -0.13
LTBR-202ENST00000440421 FLT3P36888 993 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 SCNN1AP37088 669 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 GGCXP38435 758 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 MPLP40238 635 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 DHPSP49366 369 aaPredicted RBP14.21□□□□□ -0.13
LTBR-202ENST00000440421 CREB5Q02930 508 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 LMNB2Q03252 620 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 DEUP1Q05D60 604 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 ENPP2Q13822 863 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 BYSLQ13895 437 aaKnown RBP14.21□□□□□ -0.13
LTBR-202ENST00000440421 E2F5Q15329 346 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 CSRP2Q16527 193 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 FSCBQ5H9T9 825 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 TRNP1Q6NT89 227 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 TRIM72Q6ZMU5 477 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 ARMCX6Q7L4S7 300 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 KIAA0907Q7Z7F0 614 aaPredicted RBP14.21□□□□□ -0.13
LTBR-202ENST00000440421 LUZP1Q86V48 1076 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 ZNF366Q8N895 744 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 ZNF557Q8N988 423 aaPredicted RBP14.21□□□□□ -0.13
LTBR-202ENST00000440421 FIBINQ8TAL6 211 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 RMDN1Q96DB5 314 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 NAP1L5Q96NT1 182 aaPredicted RBP14.21□□□□□ -0.13
LTBR-202ENST00000440421 TBCBQ99426 244 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 PRMT1Q99873 361 aaKnown RBP14.21□□□□□ -0.13
LTBR-202ENST00000440421 C11orf70Q9BRQ4 267 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 SIK2Q9H0K1 926 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 SMOC1Q9H4F8 434 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 CBX8Q9HC52 389 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 CD93Q9NPY3 652 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 METTL5Q9NRN9 209 aaKnown RBP14.21□□□□□ -0.13
LTBR-202ENST00000440421 PIGVQ9NUD9 493 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 RRN3Q9NYV6 651 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 PLA2G4CQ9UP65 541 aa14.21□□□□□ -0.13
LTBR-202ENST00000440421 SDK1Q7Z5N4 2213 aa14.21□□□□□ -0.14
LTBR-202ENST00000440421 CFAP54Q96N23 3096 aa14.21□□□□□ -0.14
LTBR-202ENST00000440421 ZNF292O60281 2723 aa14.21□□□□□ -0.14
LTBR-202ENST00000440421 RALGAPA1Q6GYQ0 2036 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 FRYLO94915 3013 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 THADAQ6YHU6 1953 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 LRP3O75074 770 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 PAGE1O75459 146 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 SERPINC1P01008 464 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 ATP5BP06576 529 aaKnown RBP14.2□□□□□ -0.14
LTBR-202ENST00000440421 PTMSP20962 102 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 MMP8P22894 467 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 NSFP46459 744 aaKnown RBP14.2□□□□□ -0.14
LTBR-202ENST00000440421 ID4P47928 161 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 NUMBP49757 651 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 ATXN1P54253 815 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms