RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 SIPA1Q96FS4 1042 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 PRICKLE1Q96MT3 831 aaPredicted RBP20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 CD248Q9HCU0 757 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 DDIT4Q9NX09 232 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 FHOD1Q9Y613 1164 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 LAMA1P25391 3075 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 ADAMTS9Q9P2N4 1935 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 C4orf47A7E2U8 309 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 MEI4A8MW99 385 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 GRAP2O75791 330 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 GLI1P08151 1106 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 CD6P30203 668 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 CD70P32970 193 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 ATXN3P54252 364 aaPredicted RBP20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 ST8SIA6P61647 398 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 RPS24P62847 133 aaKnown RBP20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 DRAP1Q14919 205 aaPredicted RBP20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 RAP1GAP2Q684P5 730 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 SMYD5Q6GMV2 418 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 FAM183BPQ6ZVS7 135 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 RABEPKQ7Z6M1 372 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 LGI2Q8N0V4 545 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 ATP6V0D2Q8N8Y2 350 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 ANKRD20A12PQ8NF67 263 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 BTN2A3PQ96KV6 586 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 MKRN2Q9H000 416 aaKnown RBP20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 LHX5Q9H2C1 402 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 CD93Q9NPY3 652 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 PLCB1Q9NQ66 1216 aa20.58■□□□□ 0.89
SHROOM1-204ENST00000440118 F5H5T6 163 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 H0Y626 953 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 MOCS3O95396 460 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 DLDP09622 509 aaKnown RBP20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 SLC2A3P11169 496 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 ABCB4P21439 1286 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 HOXD12P35452 270 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 MAPK8P45983 427 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 ENPP2Q13822 863 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 TAF5Q15542 800 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 UAP1L1Q3KQV9 507 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 MS4A13Q5J8X5 152 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 FKBP15Q5T1M5 1219 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 SYCP2LQ5T4T6 812 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 ADIPOR2Q86V24 386 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 FAM71AQ8IYT1 594 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 DEFB106AQ8N104 65 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 CFAP52Q8N1V2 620 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 ZNF366Q8N895 744 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 TMEM35BQ8NCS4 154 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 CEP76Q8TAP6 659 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 WFDC5Q8TCV5 224 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 GPT2Q8TD30 523 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 FOXJ1Q92949 421 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 SLC39A13Q96H72 371 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 ASNSD1Q9NWL6 643 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 EVLQ9UI08 416 aaPredicted RBP20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 PILRBQ9UKJ0 227 aa20.57■□□□□ 0.88
SHROOM1-204ENST00000440118 LUC7L3O95232 432 aaKnown RBP20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 ERBB2P04626 1255 aa20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 TACR2P21452 398 aa20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 CCR1P32246 355 aa20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 CLCN1P35523 988 aa20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 IRX4P78413 519 aa20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 NME3Q13232 169 aa20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 DUOXA1Q1HG43 343 aa20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 KLHDC7AQ5VTJ3 777 aa20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 TAF3Q5VWG9 929 aa20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 MSANTD4Q8NCY6 345 aa20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 OR2T3Q8NH03 318 aa20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 ENOX1Q8TC92 643 aaKnown RBP20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 TOE1Q96GM8 510 aaKnown RBP20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 VPS16Q9H269 839 aa20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 TMEM74BQ9NUR3 256 aa20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.56■□□□□ 0.883e-6■□□□□ 11.1
SHROOM1-204ENST00000440118 XPO7Q9UIA9 1087 aaKnown RBP20.56■□□□□ 0.88
SHROOM1-204ENST00000440118 DAB1O75553 588 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 UCHL3P15374 230 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 CYP11B1P15538 503 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 OXTRP30559 389 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 TPMTP51580 245 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 GFPT1Q06210 699 aaPredicted RBP20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 STX1AQ16623 288 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 PTPN20Q4JDL3 420 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 WDR45BQ5MNZ6 344 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 RABGAP1LQ5R372 815 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 RNF219Q5W0B1 726 aaPredicted RBP20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 FAM124AQ86V42 546 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 WDTC1Q8N5D0 677 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 FIBINQ8TAL6 211 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 PCMTD1Q96MG8 357 aaPredicted RBP20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 SLC2A13Q96QE2 648 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 GTPBP2Q9BX10 602 aaKnown RBP20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 GPR174Q9BXC1 333 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 FBRSQ9HAH7 460 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 ANO10Q9NW15 660 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 SUSD2Q9UGT4 822 aa20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 NYNRINQ9P2P1 1898 aaKnown RBP20.55■□□□□ 0.88
SHROOM1-204ENST00000440118 FAM170AA1A519 330 aa20.54■□□□□ 0.88
SHROOM1-204ENST00000440118 KCNU1A8MYU2 1149 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms