RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 NOS2P35228 1153 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 AAK1Q2M2I8 961 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 CLIP3Q96DZ5 547 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 INSL6Q9Y581 213 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.38□□□□□ -0.43
NEK1-201ENST00000439128 PER2O15055 1255 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 BMP10O95393 424 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 CFIP05156 583 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 SLC16A1P53985 500 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 EEF1DP3Q658K8 133 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 SETD3Q86TU7 594 aaPredicted RBP12.38□□□□□ -0.43
NEK1-201ENST00000439128 SUGP1Q8IWZ8 645 aaKnown RBP12.38□□□□□ -0.43
NEK1-201ENST00000439128 CNPY4Q8N129 248 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 ATAD1Q8NBU5 361 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 TBL1YQ9BQ87 522 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 TMEM121Q9BTD3 319 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 CREBZFQ9NS37 354 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 FAM153AQ9UHL3 310 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 KLF15Q9UIH9 416 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 GGCXP38435 758 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 ACTN3Q08043 901 aaPredicted RBP12.38□□□□□ -0.43
NEK1-201ENST00000439128 NRSN1Q8IZ57 195 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 MAGEC3Q8TD91 643 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 PANX3Q96QZ0 392 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 ACOX2Q99424 681 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 POLMQ9NP87 494 aaPredicted RBP12.38□□□□□ -0.43
NEK1-201ENST00000439128 PCDHA2Q9Y5H9 948 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 SNX8Q9Y5X2 465 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 GYPCP04921 128 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 CCNG1P51959 295 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 GABPB1Q06547 395 aaPredicted RBP12.38□□□□□ -0.43
NEK1-201ENST00000439128 CSHL1Q14406 222 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 DMC1Q14565 340 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 TRIM60Q495X7 471 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 STRA8Q7Z7C7 330 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 STX19Q8N4C7 294 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 DACH2Q96NX9 599 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 ZYG11BQ9C0D3 744 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 TMEM51Q9NW97 253 aa12.38□□□□□ -0.43
NEK1-201ENST00000439128 KIAA1522Q9P206 1035 aaPredicted RBP12.38□□□□□ -0.43
NEK1-201ENST00000439128 A0A088AWK7 358 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 ATP8B1O43520 1251 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 GZMAP12544 262 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 ZNF10P21506 573 aaPredicted RBP12.37□□□□□ -0.43
NEK1-201ENST00000439128 SMARCB1Q12824 385 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 KYNUQ16719 465 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 PIGZQ86VD9 579 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 MCOLN2Q8IZK6 566 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 C12orf50Q8NA57 414 aaPredicted RBP12.37□□□□□ -0.43
NEK1-201ENST00000439128 OR14C36Q8NHC7 312 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 MRPL1Q9BYD6 325 aaKnown RBP12.37□□□□□ -0.43
NEK1-201ENST00000439128 UNKQ9C0B0 810 aaKnown RBP12.37□□□□□ -0.43
NEK1-201ENST00000439128 TRPC4Q9UBN4 977 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 C2CD2Q9Y426 696 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 UBR1Q8IWV7 1749 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 TADA3O75528 432 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 EVX2Q03828 476 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 C1orf186Q6ZWK4 172 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 PRPF39Q86UA1 669 aaKnown RBP12.37□□□□□ -0.43
NEK1-201ENST00000439128 CCNJLQ8IV13 435 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 SIX5Q8N196 739 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 KREMEN2Q8NCW0 462 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 TUBGCP3Q96CW5 907 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 ZNF333Q96JL9 665 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 IGF2BP3O00425 579 aaKnown RBP eCLIP12.37□□□□□ -0.43
NEK1-201ENST00000439128 GRM6O15303 877 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 FGF10O15520 208 aaPredicted RBP12.37□□□□□ -0.43
NEK1-201ENST00000439128 HSPA9P38646 679 aaKnown RBP12.37□□□□□ -0.43
NEK1-201ENST00000439128 SERPINB8P50452 374 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 SNCBQ16143 134 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 ELMO1Q92556 727 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 TBCBQ99426 244 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 KCNMB3Q9NPA1 279 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 RBPJLQ9UBG7 517 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 TUBGCP4Q9UGJ1 667 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.37□□□□□ -0.43
NEK1-201ENST00000439128 SERPINI2O75830 405 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 ENO2P09104 434 aaPredicted RBP12.37□□□□□ -0.43
NEK1-201ENST00000439128 RPL17P18621 184 aaKnown RBP12.37□□□□□ -0.43
NEK1-201ENST00000439128 CLK2P49760 499 aaKnown RBP12.37□□□□□ -0.43
NEK1-201ENST00000439128 CLCN6P51797 869 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 GCNT1Q02742 428 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 CDH17Q12864 832 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 SLC9A5Q14940 896 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 C9orf57Q5W0N0 161 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 CENPPQ6IPU0 288 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 CYP20A1Q6UW02 462 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 HDDC3Q8N4P3 179 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 MLPHQ9BV36 600 aaPredicted RBP12.37□□□□□ -0.43
NEK1-201ENST00000439128 PIH1D1Q9NWS0 290 aaKnown RBP12.37□□□□□ -0.43
NEK1-201ENST00000439128 SMG5Q9UPR3 1016 aaKnown RBP12.37□□□□□ -0.43
NEK1-201ENST00000439128 SNX5Q9Y5X3 404 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 A0A087X0T9 212 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 TRIM49D1C9J1S8 452 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 KCNK1O00180 336 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 TIMM44O43615 452 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 FAM228BP0C875 321 aa12.37□□□□□ -0.43
NEK1-201ENST00000439128 ENO3P13929 434 aaPredicted RBP12.37□□□□□ -0.43
NEK1-201ENST00000439128 DHPSP49366 369 aaPredicted RBP12.37□□□□□ -0.43
NEK1-201ENST00000439128 VEGFBP49765 207 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms