RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 OR2T34Q8NGX1 318 aa9.03□□□□□ -0.96
SCRN1-208ENST00000438497 WFIKKN2Q8TEU8 576 aa9.03□□□□□ -0.96
SCRN1-208ENST00000438497 TMA16Q96EY4 203 aaKnown RBP9.03□□□□□ -0.96
SCRN1-208ENST00000438497 CCDC97Q96F63 343 aaPredicted RBP9.03□□□□□ -0.96
SCRN1-208ENST00000438497 EPSTI1Q96J88 318 aa9.03□□□□□ -0.96
SCRN1-208ENST00000438497 DEPDC7Q96QD5 511 aa9.03□□□□□ -0.96
SCRN1-208ENST00000438497 CGRRF1Q99675 332 aa9.03□□□□□ -0.96
SCRN1-208ENST00000438497 OMDQ99983 421 aa9.03□□□□□ -0.96
SCRN1-208ENST00000438497 FGFBP2Q9BYJ0 223 aa9.03□□□□□ -0.96
SCRN1-208ENST00000438497 ABCG4Q9H172 646 aa9.03□□□□□ -0.96
SCRN1-208ENST00000438497 XYLT2Q9H1B5 865 aa9.03□□□□□ -0.96
SCRN1-208ENST00000438497 PABPC3Q9H361 631 aaKnown RBP9.03□□□□□ -0.96
SCRN1-208ENST00000438497 MTG2Q9H4K7 406 aa9.03□□□□□ -0.96
SCRN1-208ENST00000438497 SMYD3Q9H7B4 428 aa9.03□□□□□ -0.96
SCRN1-208ENST00000438497 PANK4Q9NVE7 773 aa9.03□□□□□ -0.96
SCRN1-208ENST00000438497 ANKMY1Q9P2S6 941 aa9.03□□□□□ -0.96
SCRN1-208ENST00000438497 CCDC39Q9UFE4 941 aa9.03□□□□□ -0.96
SCRN1-208ENST00000438497 DOPEY2Q9Y3R5 2298 aa9.03□□□□□ -0.96
SCRN1-208ENST00000438497 UNC79Q9P2D8 2635 aa9.02□□□□□ -0.96
SCRN1-208ENST00000438497 TBC1D3DA0A087WVF3 549 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 TBC1D3IA0A087WXS9 549 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 TBC1D3EA0A087X179 549 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 TBC1D3KA0A087X1G2 549 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 TBC1D3FA6NER0 549 aaPredicted RBP9.02□□□□□ -0.97
SCRN1-208ENST00000438497 TBC1D3LB9A6J9 549 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 HHLA1C9JL84 531 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 TRIM38O00635 465 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 CSO75390 466 aaKnown RBP9.02□□□□□ -0.97
SCRN1-208ENST00000438497 RNASEH2AO75792 299 aaKnown RBP9.02□□□□□ -0.97
SCRN1-208ENST00000438497 AFPP02771 609 aaKnown RBP9.02□□□□□ -0.97
SCRN1-208ENST00000438497 DLDP09622 509 aaKnown RBP9.02□□□□□ -0.97
SCRN1-208ENST00000438497 TBC1D3HP0C7X1 549 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 FAM200BP0CF97 657 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 GP1BBP13224 206 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 POLR2EP19388 210 aaKnown RBP9.02□□□□□ -0.97
SCRN1-208ENST00000438497 HLA-FP30511 346 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 KIF11P52732 1056 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 NFKB2Q00653 900 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 UBAP2LQ14157 1087 aaKnown RBP9.02□□□□□ -0.97
SCRN1-208ENST00000438497 PSMD6Q15008 389 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 SNRNP35Q16560 246 aaKnown RBP9.02□□□□□ -0.97
SCRN1-208ENST00000438497 ARL13BQ3SXY8 428 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 CDCP2Q5VXM1 449 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 RRAGBQ5VZM2 374 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 MBLAC2Q68D91 279 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 TBC1D3GQ6DHY5 549 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 TBC1D3CQ6IPX1 549 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 TMC6Q7Z403 805 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 ADIPOR2Q86V24 386 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 SPATS2Q86XZ4 545 aaKnown RBP9.02□□□□□ -0.97
SCRN1-208ENST00000438497 TBC1D3Q8IZP1 549 aaPredicted RBP9.02□□□□□ -0.97
SCRN1-208ENST00000438497 SLC25A45Q8N413 288 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 C12orf29Q8N999 325 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 MFSD2AQ8NA29 543 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 CDK5RAP1Q96SZ6 601 aaKnown RBP9.02□□□□□ -0.97
SCRN1-208ENST00000438497 ARHGAP9Q9BRR9 750 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 GZF1Q9H116 711 aaPredicted RBP9.02□□□□□ -0.97
SCRN1-208ENST00000438497 RSPH9Q9H1X1 276 aaPredicted RBP9.02□□□□□ -0.97
SCRN1-208ENST00000438497 ASCL3Q9NQ33 180 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 FAM49BQ9NUQ9 324 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 ABCB8Q9NUT2 735 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 CLIC5Q9NZA1 410 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 STK17AQ9UEE5 414 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 SEPT3Q9UH03 358 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 KIF3AQ9Y496 699 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 PCDHA5Q9Y5H7 936 aa9.02□□□□□ -0.97
SCRN1-208ENST00000438497 TDRD6O60522 2096 aaKnown RBP9.01□□□□□ -0.97
SCRN1-208ENST00000438497 A0A1W2PP55 124 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 SLC12A8A0AV02 714 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 H3BQV1 296 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 CLIC2O15247 247 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 MID1O15344 667 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 SUV39H1O43463 412 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 MAGEC1O60732 1142 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 SDC3O75056 442 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 BMP15O95972 392 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 PYGBP11216 843 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 MYF5P13349 255 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 TRIM21P19474 475 aaKnown RBP9.01□□□□□ -0.97
SCRN1-208ENST00000438497 SLC8A1P32418 973 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 NDST1P52848 882 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 ST8SIA6P61647 398 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 ASIC1P78348 528 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 CYP24A1Q07973 514 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 STAT4Q14765 748 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 E2F4Q16254 413 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 ZSCAN23Q3MJ62 389 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 LINC00303Q3SY05 128 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 SCARA5Q6ZMJ2 495 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 CLEC20AQ6ZU45 233 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 STXBP4Q6ZWJ1 553 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 SND1Q7KZF4 910 aaKnown RBP eCLIP9.01□□□□□ -0.97
SCRN1-208ENST00000438497 CCDC186Q7Z3E2 898 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 KIAA0907Q7Z7F0 614 aaPredicted RBP9.01□□□□□ -0.97
SCRN1-208ENST00000438497 PRPF39Q86UA1 669 aaKnown RBP9.01□□□□□ -0.97
SCRN1-208ENST00000438497 AHI1Q8N157 1196 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 OR14C36Q8NHC7 312 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 ELMO3Q96BJ8 720 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 CYFIP2Q96F07 1278 aa9.01□□□□□ -0.97
SCRN1-208ENST00000438497 SLC46A1Q96NT5 459 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms