RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 VCX3BQ9H321 246 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 VCX3AQ9NNX9 186 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 RNF181Q9P0P0 153 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 PPARGC1AQ9UBK2 798 aaKnown RBP10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 EMCNQ9ULC0 261 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 LRRC42Q9Y546 428 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 SBF1O95248 1867 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 DICER1Q9UPY3 1922 aaKnown RBP10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 DCAF8L1A6NGE4 600 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 CAPN14A8MX76 684 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 H3BRJ5 948 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 I3L4J1 428 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 LIN7AO14910 233 aaPredicted RBP10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 ZSCAN9O15535 394 aaPredicted RBP10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 DGKIO75912 1065 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 IL1BP01584 269 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 BPGMP07738 259 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 HNRNPCP07910 306 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 MGAT1P26572 445 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 GNL1P36915 607 aaPredicted RBP10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 FBXO47Q5MNV8 452 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 CTU1Q7Z7A3 348 aaKnown RBP10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 RNF169Q8NCN4 708 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 GPRC5AQ8NFJ5 357 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 LENG1Q96BZ8 264 aaPredicted RBP10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 C7orf26Q96N11 449 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 VTA1Q9NP79 307 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 COL1A2P08123 1366 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 ACAT1P24752 427 aaKnown RBP10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 CRHR1P34998 444 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 RPL10AP62906 217 aaKnown RBP10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 KDSRQ06136 332 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 ADIGQ0VDE8 80 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 RCN1Q15293 331 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 PIGZQ86VD9 579 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 COLGALT1Q8NBJ5 622 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 BEST2Q8NFU1 509 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 TFB1MQ8WVM0 346 aaKnown RBP10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 EMID1Q96A84 441 aaPredicted RBP10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 PLEKHA5Q9HAU0 1116 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 SEPT10Q9P0V9 454 aa10.71□□□□□ -0.69
CLSTN1-203ENST00000435891 SMIM28A0A1B0GU29 152 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 RBM47A0AV96 593 aaKnown RBP10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 B2RBV5 119 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 SNNO75324 88 aaPredicted RBP10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 KCNA4P22459 653 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 ARRB2P32121 409 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 BCAT1P54687 386 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 ALDH18A1P54886 795 aaKnown RBP10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 AP1B1Q10567 949 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 UBAP2LQ14157 1087 aaKnown RBP10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 KRT72Q14CN4 511 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 DCAF4L1Q3SXM0 396 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 DCAF6Q58WW2 860 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 PPM1JQ5JR12 505 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 LGSNQ5TDP6 509 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 SYPL2Q5VXT5 272 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 HFE2Q6ZVN8 426 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 ZNF410Q86VK4 478 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 OSTM1Q86WC4 334 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 LRRC52Q8N7C0 313 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 RBM15BQ8NDT2 890 aaKnown RBP10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 SHCBP1Q8NEM2 672 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 MCUR1Q96AQ8 359 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 P2RY11Q96G91 374 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 YIPF2Q9BWQ6 316 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 KCNK4Q9NYG8 393 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.71□□□□□ -0.73e-6■■■□□ 19.1
CLSTN1-203ENST00000435891 GTF2IRD1Q9UHL9 959 aa10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 HBS1LQ9Y450 684 aaKnown RBP10.71□□□□□ -0.7
CLSTN1-203ENST00000435891 A0A0A0MRY4 1105 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 CCDC160A6NGH7 325 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 KPNA7A9QM74 516 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 PIRO00625 290 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 TPP1O14773 563 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 TBX10O75333 385 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 FAM200BP0CF97 657 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 SP100P23497 879 aaPredicted RBP10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 PSMB4P28070 264 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 TMED1Q13445 227 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 PRAMEF19Q5SWL8 479 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 UNC93AQ86WB7 457 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 ZDHHC17Q8IUH5 632 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 ARRDC4Q8NCT1 418 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 SPATA13Q96N96 652 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 DCLRE1BQ9H816 532 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 ANLNQ9NQW6 1124 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 ZNF358Q9NW07 568 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 FZD10Q9ULW2 581 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 FAM72CH0Y354 149 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 I6L893 689 aaPredicted RBP10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 RNF103O00237 685 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 USP12O75317 370 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 PRKCGP05129 697 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 ZCCHC18P0CG32 403 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 NR2C2P49116 596 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 SULT1E1P49888 294 aa10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 PDE1CQ14123 709 aaPredicted RBP10.7□□□□□ -0.7
CLSTN1-203ENST00000435891 ZRSR2Q15696 482 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms