RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 MAPK8P45983 427 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 PRKAA2P54646 552 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 MTAPQ13126 283 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 OLFML2BQ68BL8 750 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 STRA8Q7Z7C7 330 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 EXOC3L1Q86VI1 746 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 ZDHHC17Q8IUH5 632 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 CLIP3Q96DZ5 547 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 RBM22Q9NW64 420 aaKnown RBP eCLIP11.44□□□□□ -0.58
SCN4A-201ENST00000435607 COMMD9Q9P000 198 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 ACOT9Q9Y305 439 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 RGS14O43566 566 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 ZNF862O60290 1169 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 MED24O75448 989 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 FGF19O95750 216 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 PTGES3Q15185 160 aaKnown RBP11.44□□□□□ -0.58
SCN4A-201ENST00000435607 ARSJQ5FYB0 599 aaPredicted RBP11.44□□□□□ -0.58
SCN4A-201ENST00000435607 GPR135Q8IZ08 494 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 MYCBPAPQ8TBZ2 947 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 MFN2O95140 757 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 KCNA3P22001 575 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 HNRNPH1P31943 449 aaKnown RBP11.44□□□□□ -0.58
SCN4A-201ENST00000435607 MDM1Q8TC05 714 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 HPS3Q969F9 1004 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 TPD52L3Q96J77 140 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 TRIM49D1C9J1S8 452 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 TKTL1P51854 596 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 PKP1Q13835 747 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 SMU1Q2TAY7 513 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 LIN54Q6MZP7 749 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 CHN1P15882 459 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 CYP11B2P19099 503 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 COMTP21964 271 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 ZNF135P52742 658 aaPredicted RBP11.43□□□□□ -0.58
SCN4A-201ENST00000435607 INTS11Q5TA45 600 aaKnown RBP11.43□□□□□ -0.58
SCN4A-201ENST00000435607 FIBCD1Q8N539 461 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 VANGL2Q9ULK5 521 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 TSC22D4Q9Y3Q8 395 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 MAGEC1O60732 1142 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 CCNDBP1O95273 360 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 GPD2P43304 727 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 CCDC54Q8NEL0 328 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 DDHD1Q8NEL9 900 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 OR56A4Q8NGH8 313 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 PRMT6Q96LA8 375 aaPredicted RBP11.43□□□□□ -0.58
SCN4A-201ENST00000435607 BDH2Q9BUT1 245 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 SPATA9Q9BWV2 254 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 SNX12Q9UMY4 172 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 AP4E1Q9UPM8 1137 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 GSTK1Q9Y2Q3 226 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 MRPS17Q9Y2R5 130 aaKnown RBP11.43□□□□□ -0.58
SCN4A-201ENST00000435607 H3BRB1 525 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 TMEM253P0C7T8 217 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 RPA3P35244 121 aaPredicted RBP11.43□□□□□ -0.58
SCN4A-201ENST00000435607 TEAD4Q15561 434 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 GALNT18Q6P9A2 607 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 FBXO16Q8IX29 292 aaPredicted RBP11.43□□□□□ -0.58
SCN4A-201ENST00000435607 FAM172AQ8WUF8 416 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 ZNF354BQ96LW1 612 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 ZDHHC15Q96MV8 337 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 SYT15Q9BQS2 421 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 MTMR12Q9C0I1 747 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 TUT1Q9H6E5 874 aaKnown RBP11.43□□□□□ -0.58
SCN4A-201ENST00000435607 NMRAL1Q9HBL8 299 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 TAF6LQ9Y6J9 622 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 PNMA8CA0A1B0GUJ8 204 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 ERI2A8K979 691 aaKnown RBP11.43□□□□□ -0.58
SCN4A-201ENST00000435607 TSPAN3O60637 253 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 ACTR3P61158 418 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 CPB2Q96IY4 423 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 MAP3K14Q99558 947 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 NECTIN3Q9NQS3 549 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 ADH1AP07327 375 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 TSPAN19P0C672 248 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 RBBP4Q09028 425 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 MB21D2Q8IYB1 491 aaPredicted RBP11.43□□□□□ -0.58
SCN4A-201ENST00000435607 ASB2Q96Q27 587 aa11.43□□□□□ -0.58
SCN4A-201ENST00000435607 ZNF214Q9UL59 606 aaPredicted RBP11.43□□□□□ -0.58
SCN4A-201ENST00000435607 UMODL1Q5DID0 1318 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 TRIM43BA6NCK2 446 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 TPST1O60507 370 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 CRABP2P29373 138 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 PPM1AP35813 382 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 NRG3P56975 720 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 LGALS3BPQ08380 585 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 MPP3Q13368 585 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 RSBN1Q5VWQ0 802 aaPredicted RBP11.42□□□□□ -0.58
SCN4A-201ENST00000435607 ZNF57Q68EA5 555 aaPredicted RBP11.42□□□□□ -0.58
SCN4A-201ENST00000435607 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.42□□□□□ -0.58
SCN4A-201ENST00000435607 CENPIQ92674 756 aaPredicted RBP11.42□□□□□ -0.58
SCN4A-201ENST00000435607 COL26A1Q96A83 441 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 PI4K2AQ9BTU6 479 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 ZNHIT2Q9UHR6 403 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 KLF15Q9UIH9 416 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 PDHXO00330 501 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 LSM8O95777 96 aaKnown RBP11.42□□□□□ -0.58
SCN4A-201ENST00000435607 SERPINB5P36952 375 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 LYPLAL1Q5VWZ2 237 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 MFSD7Q6UXD7 560 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 SERPINA13PQ6UXR4 307 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms