RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 NUP62CLQ9H1M0 184 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 MAP6D1Q9H9H5 199 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 SIRT3Q9NTG7 399 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-205ENST00000433888 RPS10-NUDT3A0A1W2PQS6 291 aa4.3□□□□□ -1.72
PTPN4-205ENST00000433888 ZSCAN9O15535 394 aaPredicted RBP4.3□□□□□ -1.72
PTPN4-205ENST00000433888 PPP6R2O75170 966 aa4.3□□□□□ -1.72
PTPN4-205ENST00000433888 KAT7O95251 611 aa4.3□□□□□ -1.72
PTPN4-205ENST00000433888 NFATC4Q14934 902 aa4.3□□□□□ -1.72
PTPN4-205ENST00000433888 INO80DQ53TQ3 878 aaPredicted RBP4.3□□□□□ -1.72
PTPN4-205ENST00000433888 USP17L6PQ6QN14 398 aa4.3□□□□□ -1.72
PTPN4-205ENST00000433888 ELP5Q8TE02 316 aa4.3□□□□□ -1.72
PTPN4-205ENST00000433888 DNASE2BQ8WZ79 361 aa4.3□□□□□ -1.72
PTPN4-205ENST00000433888 LRRC46Q96FV0 321 aa4.3□□□□□ -1.72
PTPN4-205ENST00000433888 GDF15Q99988 308 aa4.3□□□□□ -1.72
PTPN4-205ENST00000433888 APOL5Q9BWW9 433 aa4.3□□□□□ -1.72
PTPN4-205ENST00000433888 PLK2Q9NYY3 685 aa4.3□□□□□ -1.72
PTPN4-205ENST00000433888 WNT16Q9UBV4 365 aa4.3□□□□□ -1.72
PTPN4-205ENST00000433888 ZMYND8Q9ULU4 1186 aaPredicted RBP4.3□□□□□ -1.72
PTPN4-205ENST00000433888 INSL5Q9Y5Q6 135 aa4.3□□□□□ -1.72
PTPN4-205ENST00000433888 DPPA5A6NC42 116 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 TSPAN6O43657 245 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 ACAA1P09110 424 aaPredicted RBP4.29□□□□□ -1.72
PTPN4-205ENST00000433888 FGFR2P21802 821 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 GABRB3P28472 473 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 PIK3CBP42338 1070 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 GAD2Q05329 585 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 ZNF543Q08ER8 600 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 WASHC2DQ5SRD0 308 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 C9orf50Q5SZB4 431 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 KLHDC7AQ5VTJ3 777 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 CUZD1Q86UP6 607 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 PAQR4Q8N4S7 273 aaPredicted RBP4.29□□□□□ -1.72
PTPN4-205ENST00000433888 KAT2AQ92830 837 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 NUDT22Q9BRQ3 303 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 ISCUQ9H1K1 167 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 TASP1Q9H6P5 420 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 PNPLA8Q9NP80 782 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 TXLNGQ9NUQ3 528 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 OBP2AQ9NY56 170 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 SNX13Q9Y5W8 968 aa4.29□□□□□ -1.72
PTPN4-205ENST00000433888 RHODO00212 210 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 HOXC6P09630 235 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 CIITAP33076 1130 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 GSTM5P46439 218 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 DSCR9P59020 149 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 KRTAP27-1Q3LI81 207 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 SLC39A5Q6ZMH5 540 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 MYO1HQ8N1T3 1032 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 PRR26Q8N8Z3 221 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 LMO3Q8TAP4 145 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 WFIKKN2Q8TEU8 576 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 PHF21BQ96EK2 531 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 SLITRK1Q96PX8 696 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 PCDHAC1Q9H158 963 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 PLAC1Q9HBJ0 212 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 MYO1AQ9UBC5 1043 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 CORO2BQ9UQ03 480 aa4.28□□□□□ -1.72
PTPN4-205ENST00000433888 GXYLT2A0PJZ3 443 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 FOXO6A8MYZ6 492 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 CNTN5O94779 1100 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 EGR1P18146 543 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 RGS19P49795 217 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 RASSF2P50749 326 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 SLC37A1P57057 533 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 Q0VFX4 171 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 SLC5A9Q2M3M2 681 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 DGKKQ5KSL6 1271 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 Q5PR19 223 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 TTC39AQ5SRH9 613 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 MSANTD2Q6P1R3 559 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 PARM1Q6UWI2 310 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 LRIG3Q6UXM1 1119 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 RTL10Q7L3V2 364 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 CTU1Q7Z7A3 348 aaKnown RBP4.27□□□□□ -1.73
PTPN4-205ENST00000433888 NPIPB3Q92617 1050 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 PAAF1Q9BRP4 392 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 ABHD14AQ9BUJ0 271 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 MAGEB5Q9BZ81 275 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 PRDM16Q9HAZ2 1276 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 KCNK9Q9NPC2 374 aa4.27□□□□□ -1.73
PTPN4-205ENST00000433888 LMTK3Q96Q04 1460 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 A0A087WYN8 130 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 GAGE12JA6NER3 117 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 RHPN2P1A8MT19 583 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 BECN2A8MW95 431 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 ERVV-2B6SEH9 535 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 INAFM1C9JVW0 142 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 PAPSS2O95340 614 aaPredicted RBP4.26□□□□□ -1.73
PTPN4-205ENST00000433888 KLKB1P03952 638 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 MYL4P12829 197 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 PECAM1P16284 738 aaPredicted RBP4.26□□□□□ -1.73
PTPN4-205ENST00000433888 TSHRP16473 764 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 RFX5P48382 616 aaPredicted RBP4.26□□□□□ -1.73
PTPN4-205ENST00000433888 ENTPD1P49961 510 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 ROR2Q01974 943 aaKnown RBP4.26□□□□□ -1.73
PTPN4-205ENST00000433888 GFOD2Q3B7J2 385 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 NADSYN1Q6IA69 706 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 HMBOX1Q6NT76 420 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 PPP4R4Q6NUP7 873 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 FAM177A1Q8N128 213 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms