RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 OTUD4Q01804 1114 aaKnown RBP18.83■□□□□ 0.6
HMGN1-206ENST00000431390 LMNB2Q03252 620 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 BYSLQ13895 437 aaKnown RBP18.83■□□□□ 0.6
HMGN1-206ENST00000431390 DUSP6Q16828 381 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 FAM72AQ5TYM5 149 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 FAM72DQ6L9T8 149 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 GAREM2Q75VX8 874 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 ADGRD2Q7Z7M1 963 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 FAM72BQ86X60 149 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 UNC45BQ8IWX7 931 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 LEMD2Q8NC56 503 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 ATL2Q8NHH9 583 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 SLC35B2Q8TB61 432 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 MRPS31Q92665 395 aaKnown RBP18.83■□□□□ 0.6
HMGN1-206ENST00000431390 P3H4Q92791 437 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 PLD4Q96BZ4 506 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 GCNAQ96QF7 691 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 CDCA3Q99618 268 aaPredicted RBP18.83■□□□□ 0.6
HMGN1-206ENST00000431390 TLE6Q9H808 572 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 STIM2Q9P246 746 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 PRKAG3Q9UGI9 489 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 DRG1Q9Y295 367 aaKnown RBP18.83■□□□□ 0.6
HMGN1-206ENST00000431390 CLUHO75153 1309 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 C5orf42Q9H799 3197 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 C2orf78A6NCI8 922 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 DYNC1I1O14576 645 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 XYLBO75191 536 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 RFPL2O75678 378 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 OLFM2O95897 454 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 MOCS2O96007 188 aaPredicted RBP18.82■□□□□ 0.6
HMGN1-206ENST00000431390 PTPN2P17706 415 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 LTBRP36941 435 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 PTGIRP43119 386 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 NR2C2P49116 596 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 VCPP55072 806 aaKnown RBP18.82■□□□□ 0.6
HMGN1-206ENST00000431390 SNX1Q13596 522 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 NOMO1Q15155 1222 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 MANEALQ5VSG8 457 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 HS6ST3Q8IZP7 471 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 HAUS1Q96CS2 278 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 CORO1BQ9BR76 489 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 EPC1Q9H2F5 836 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 DMGDHQ9UI17 866 aaKnown RBP18.82■□□□□ 0.6
HMGN1-206ENST00000431390 DNPEPQ9ULA0 475 aa18.82■□□□□ 0.6
HMGN1-206ENST00000431390 C19orf67A6NJJ6 358 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 DCLK1O15075 740 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 TTI1O43156 1089 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 DAPK3O43293 454 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 LRIG2O94898 1065 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 HEXIM1O94992 359 aaKnown RBP18.81■□□□□ 0.6
HMGN1-206ENST00000431390 PAPLNO95428 1278 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 ECEL1O95672 775 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 PECAM1P16284 738 aaPredicted RBP18.81■□□□□ 0.6
HMGN1-206ENST00000431390 AMPD1P23109 780 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 MCM3P25205 808 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 HOXC13P31276 330 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 KCNJ1P48048 391 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 MLLT6P55198 1093 aaPredicted RBP18.81■□□□□ 0.6
HMGN1-206ENST00000431390 SLC7A5Q01650 507 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 OASLQ15646 514 aaKnown RBP18.81■□□□□ 0.6
HMGN1-206ENST00000431390 NCBP2-AS2Q69YL0 99 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 WDR93Q6P2C0 686 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 SYDE1Q6ZW31 735 aaPredicted RBP18.81■□□□□ 0.6
HMGN1-206ENST00000431390 RBM23Q86U06 439 aaKnown RBP18.81■□□□□ 0.6
HMGN1-206ENST00000431390 JAMLQ86YT9 394 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 ADHFE1Q8IWW8 467 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 PPP2R3CQ969Q6 453 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 PARD6BQ9BYG5 372 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 RNF38Q9H0F5 515 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 SIK2Q9H0K1 926 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 RAB21Q9UL25 225 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 HS3ST4Q9Y661 456 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 ZNF318Q5VUA4 2279 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 PIEZO1Q92508 2521 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 MCF2LO15068 1137 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 GAS8O95995 478 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 ITGAVP06756 1048 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 HMBSP08397 361 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 NHLH1Q02575 133 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 DLX2Q07687 328 aaPredicted RBP18.81■□□□□ 0.6
HMGN1-206ENST00000431390 PAFAH1B3Q15102 231 aaKnown RBP18.81■□□□□ 0.6
HMGN1-206ENST00000431390 PIK3R6Q5UE93 754 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 BZW1Q7L1Q6 419 aaKnown RBP18.81■□□□□ 0.6
HMGN1-206ENST00000431390 AZIN2Q96A70 460 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 PNKPQ96T60 521 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 FAM118BQ9BPY3 351 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 KLF16Q9BXK1 252 aaPredicted RBP18.81■□□□□ 0.6
HMGN1-206ENST00000431390 PRKD2Q9BZL6 878 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 RAB17Q9H0T7 212 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 SAE1Q9UBE0 346 aaPredicted RBP18.81■□□□□ 0.6
HMGN1-206ENST00000431390 XPO7Q9UIA9 1087 aaKnown RBP18.81■□□□□ 0.6
HMGN1-206ENST00000431390 SNX10Q9Y5X0 201 aa18.81■□□□□ 0.6
HMGN1-206ENST00000431390 BHMG1C9JSJ3 638 aaPredicted RBP18.8■□□□□ 0.6
HMGN1-206ENST00000431390 FGF10O15520 208 aaPredicted RBP18.8■□□□□ 0.6
HMGN1-206ENST00000431390 MYL4P12829 197 aa18.8■□□□□ 0.6
HMGN1-206ENST00000431390 ERCC2P18074 760 aa18.8■□□□□ 0.6
HMGN1-206ENST00000431390 DDX6P26196 483 aaKnown RBP eCLIP18.8■□□□□ 0.61e-5■■■□□ 17.8
HMGN1-206ENST00000431390 EPHB2P29323 1055 aa18.8■□□□□ 0.6
HMGN1-206ENST00000431390 NRIP1P48552 1158 aa18.8■□□□□ 0.6
HMGN1-206ENST00000431390 HARS2P49590 506 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms