RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 POLR1BQ9H9Y6 1135 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 RGS18Q9NS28 235 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.33□□□□□ -1.41e-6■□□□□ 10.4
CHD8-202ENST00000430710 VAV3Q9UKW4 847 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 VANGL2Q9ULK5 521 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 RAB26Q9ULW5 256 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 WDR37Q9Y2I8 494 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 AP4B1Q9Y6B7 739 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 CLTCQ00610 1675 aaKnown RBP6.33□□□□□ -1.4
CHD8-202ENST00000430710 BTN3A3O00478 584 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 AKAP3O75969 853 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 SYN1P17600 705 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 FGFR3P22607 806 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 RFX5P48382 616 aaPredicted RBP6.33□□□□□ -1.4
CHD8-202ENST00000430710 CDC42EP1Q00587 391 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 SPIRE1Q08AE8 756 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 TRAP1Q12931 704 aaKnown RBP6.33□□□□□ -1.4
CHD8-202ENST00000430710 ACVR2BQ13705 512 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 GIT2Q14161 759 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 TAF5Q15542 800 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 NTRK3Q16288 839 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 RNF220Q5VTB9 566 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 TTC7BQ86TV6 843 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 LDHDQ86WU2 507 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 AADATQ8N5Z0 425 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 ZSCAN18Q8TBC5 510 aaPredicted RBP6.33□□□□□ -1.4
CHD8-202ENST00000430710 CELF1Q92879 486 aaKnown RBP6.33□□□□□ -1.4
CHD8-202ENST00000430710 HPS1Q92902 700 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 CYP4F12Q9HCS2 524 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 CCDC167Q9P0B6 97 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 SLIT1O75093 1534 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 SALL1Q9NSC2 1324 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 MAFGO15525 162 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 SLC37A4O43826 429 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 GALK1P51570 392 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 HPCAP84074 193 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 MAD2L1Q13257 205 aaPredicted RBP6.33□□□□□ -1.4
CHD8-202ENST00000430710 TKFCQ3LXA3 575 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 DUPD1Q68J44 220 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 CYP4Z2PQ8N1L4 340 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 PDPRQ8NCN5 879 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 ITFG1Q8TB96 612 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 SYTL2Q9HCH5 934 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 TRIM39Q9HCM9 518 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 ABCB10Q9NRK6 738 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 MRPL39Q9NYK5 338 aaKnown RBP6.33□□□□□ -1.4
CHD8-202ENST00000430710 WWOXQ9NZC7 414 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 DUSP12Q9UNI6 340 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 MYH9P35579 1960 aaKnown RBP6.33□□□□□ -1.4
CHD8-202ENST00000430710 IRS2Q9Y4H2 1338 aa6.33□□□□□ -1.4
CHD8-202ENST00000430710 NCAM2O15394 837 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 GSC2O15499 205 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 ZNF12P17014 697 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 HOXB8P17481 243 aaPredicted RBP6.32□□□□□ -1.4
CHD8-202ENST00000430710 NME5P56597 212 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 CNTN1Q12860 1018 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 ACAP1Q15027 740 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 TIGD7Q6NT04 549 aaPredicted RBP6.32□□□□□ -1.4
CHD8-202ENST00000430710 PIAS4Q8N2W9 510 aaPredicted RBP6.32□□□□□ -1.4
CHD8-202ENST00000430710 KBTBD8Q8NFY9 601 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 SLC20A1Q8WUM9 679 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 SPATA33Q96N06 139 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 GLIS2Q9BZE0 524 aaPredicted RBP6.32□□□□□ -1.4
CHD8-202ENST00000430710 ROGDIQ9GZN7 287 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 SEMA6AQ9H2E6 1030 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 RPRD1BQ9NQG5 326 aaKnown RBP6.32□□□□□ -1.4
CHD8-202ENST00000430710 FAM49BQ9NUQ9 324 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 SNX9Q9Y5X1 595 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 KDM6AO15550 1401 aaPredicted RBP6.32□□□□□ -1.4
CHD8-202ENST00000430710 TRIM43BA6NCK2 446 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 TRMUO75648 421 aaKnown RBP6.32□□□□□ -1.4
CHD8-202ENST00000430710 ETS1P14921 441 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 MYL12AP19105 171 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 GARTP22102 1010 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 PRKCIP41743 596 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 C1QTNF8P60827 252 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 FAAP100Q0VG06 881 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 BNIP1Q12981 228 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 BMPR2Q13873 1038 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 GPR107Q5VW38 600 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 CYP2R1Q6VVX0 501 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 KBTBD2Q8IY47 623 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 MCOLN2Q8IZK6 566 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 PQLC1Q8N2U9 271 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 SLC7A14Q8TBB6 771 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 ACMSDQ8TDX5 336 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 PROX1Q92786 737 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 PABPC5Q96DU9 382 aaKnown RBP6.32□□□□□ -1.4
CHD8-202ENST00000430710 PNMA5Q96PV4 448 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 EHD3Q9NZN3 535 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 FARP1Q9Y4F1 1045 aaPredicted RBP6.32□□□□□ -1.4
CHD8-202ENST00000430710 COL15A1P39059 1388 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 SAGE2PA6NJ88 616 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 BIRC5O15392 142 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 CHRM3P20309 590 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 PPP3CCP48454 512 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 MSLNQ13421 630 aaPredicted RBP6.32□□□□□ -1.4
CHD8-202ENST00000430710 NFIL3Q16649 462 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 KIAA0408Q6ZU52 694 aa6.32□□□□□ -1.4
CHD8-202ENST00000430710 ACTRT2Q8TDY3 377 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms