RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ACE2Q9BYF1 805 aaPredicted RBP19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 RAB20Q9NX57 234 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 HESX1Q9UBX0 185 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 SUN2Q9UH99 717 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 STOML2Q9UJZ1 356 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 NCKAP1Q9Y2A7 1128 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 PLXNA2O75051 1894 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 PTPRQQ9UMZ3 2332 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 YJEFN3A6XGL0 299 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 E7ENQ6 273 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 PLK4O00444 970 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 DFNA5O60443 496 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 TBL1XO60907 577 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 IGHV4-34P06331 123 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 CD70P32970 193 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 ABCG1P45844 678 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 KIAA0895LQ68EN5 471 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 RFWD3Q6PCD5 774 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 KIAA0907Q7Z7F0 614 aaPredicted RBP19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 SIX6OS1Q8N1H7 587 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 WFDC5Q8TCV5 224 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 SLC6A18Q96N87 628 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 ORAI3Q9BRQ5 295 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 MTG2Q9H4K7 406 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 RCOR1Q9UKL0 485 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 TSPAN16Q9UKR8 245 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 SHROOM3Q8TF72 1996 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 CFAP46Q8IYW2 2715 aa19.06■□□□□ 0.64
UPK3BP1-201ENST00000428678 ASH1LQ9NR48 2969 aaKnown RBP19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 A0A1B0GTQ1 180 aa19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 VILLO15195 856 aa19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 RHOBTB3O94955 611 aa19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 PRR29P0C7W0 189 aa19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 RACK1P63244 317 aaKnown RBP19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 BST2Q10589 180 aaKnown RBP19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 SGO2Q562F6 1265 aa19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 PRAMEF14Q5SWL7 426 aa19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 TMPRSS12Q86WS5 348 aa19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 GATAD2AQ86YP4 633 aa19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 PIP4K2CQ8TBX8 421 aa19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 EEF2KMTQ96G04 330 aa19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 RSPH9Q9H1X1 276 aaPredicted RBP19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 PABPC3Q9H361 631 aaKnown RBP19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 ABCC13Q9NSE7 274 aa19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 FBXL12Q9NXK8 326 aa19.05■□□□□ 0.64
UPK3BP1-201ENST00000428678 E9PAM4 449 aa19.04■□□□□ 0.64
UPK3BP1-201ENST00000428678 ENC1O14682 589 aa19.04■□□□□ 0.64
UPK3BP1-201ENST00000428678 PAPSS1O43252 624 aaPredicted RBP19.04■□□□□ 0.64
UPK3BP1-201ENST00000428678 STX10O60499 249 aa19.04■□□□□ 0.64
UPK3BP1-201ENST00000428678 RNASEH1O60930 286 aaKnown RBP19.04■□□□□ 0.64
UPK3BP1-201ENST00000428678 HSP90AA1P07900 732 aaKnown RBP19.04■□□□□ 0.64
UPK3BP1-201ENST00000428678 CD19P15391 556 aa19.04■□□□□ 0.64
UPK3BP1-201ENST00000428678 CMA1P23946 247 aa19.04■□□□□ 0.64
UPK3BP1-201ENST00000428678 ST8SIA6P61647 398 aa19.04■□□□□ 0.64
UPK3BP1-201ENST00000428678 USP30Q70CQ3 517 aa19.04■□□□□ 0.64
UPK3BP1-201ENST00000428678 GUF1Q8N442 669 aaKnown RBP19.04■□□□□ 0.64
UPK3BP1-201ENST00000428678 UBA3Q8TBC4 463 aa19.04■□□□□ 0.64
UPK3BP1-201ENST00000428678 SKA1Q96BD8 255 aa19.04■□□□□ 0.64
UPK3BP1-201ENST00000428678 NXPE2Q96DL1 559 aa19.04■□□□□ 0.64
UPK3BP1-201ENST00000428678 ELF4Q99607 663 aaPredicted RBP19.04■□□□□ 0.64
UPK3BP1-201ENST00000428678 STIM2Q9P246 746 aa19.04■□□□□ 0.64
UPK3BP1-201ENST00000428678 GOLGA6L7A0A1B0GV03 622 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 A0A1W2PPC4 97 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 CBX4O00257 560 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 SIN3BO75182 1162 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 LCP1P13796 627 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 JUPP14923 745 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 ABCB4P21439 1286 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 HNF1BP35680 557 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 SLC11A2P49281 568 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 GALCP54803 685 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 CLDN6P56747 220 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 MPP7Q5T2T1 576 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 PIK3R6Q5UE93 754 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 NCEH1Q6PIU2 408 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 MFN1Q8IWA4 741 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 CNDP2Q96KP4 475 aaKnown RBP19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 AASDHPPTQ9NRN7 309 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 SERGEFQ9UGK8 458 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 SCML1Q9UN30 329 aa19.03■□□□□ 0.64
UPK3BP1-201ENST00000428678 COL5A1P20908 1838 aaPredicted RBP19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 A0A1W2PP55 124 aa19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 LRRC72A6NJI9 287 aa19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 MID1O15344 667 aa19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 LDOC1O95751 146 aaPredicted RBP19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 ITGAVP06756 1048 aa19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 EPB41P11171 864 aaKnown RBP19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 SYKP43405 635 aa19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 DAOAP59103 153 aa19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 SFSWAPQ12872 951 aaKnown RBP19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 PKP1Q13835 747 aa19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 ZCWPW2Q504Y3 356 aa19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 FAM133BQ5BKY9 247 aaKnown RBP19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 C6orf118Q5T5N4 469 aa19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 UNC45BQ8IWX7 931 aa19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 DHX40Q8IX18 779 aaKnown RBP19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 ZNF557Q8N988 423 aaPredicted RBP19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 UBL7Q96S82 380 aaPredicted RBP19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 OMDQ99983 421 aa19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 CNGB3Q9NQW8 809 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms