RNA–Protein interactions for RNA: ENST00000427795.2

XPC-202, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 2

Gene XPC, Length 820 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-202ENST00000427795 WFIKKN2Q8TEU8 576 aa12.78□□□□□ -0.36
XPC-202ENST00000427795 PARD3BQ8TEW8 1205 aa12.78□□□□□ -0.36
XPC-202ENST00000427795 SNRNP27Q8WVK2 155 aaKnown RBP12.78□□□□□ -0.36
XPC-202ENST00000427795 CDK5RAP1Q96SZ6 601 aaKnown RBP12.78□□□□□ -0.36
XPC-202ENST00000427795 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.78□□□□□ -0.36
XPC-202ENST00000427795 NEUROG2Q9H2A3 272 aa12.78□□□□□ -0.36
XPC-202ENST00000427795 GGA2Q9UJY4 613 aa12.78□□□□□ -0.36
XPC-202ENST00000427795 SPTBN1Q01082 2364 aaKnown RBP12.78□□□□□ -0.36
XPC-202ENST00000427795 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.77□□□□□ -0.37
XPC-202ENST00000427795 A0A1W2PP55 124 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 MID1O15344 667 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 SIN3BO75182 1162 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 PABPC1P11940 636 aaKnown RBP12.77□□□□□ -0.37
XPC-202ENST00000427795 CD70P32970 193 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 UCNP55089 124 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 DLG4P78352 724 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 INCA1Q0VD86 236 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 TRIP4Q15650 581 aaPredicted RBP12.77□□□□□ -0.37
XPC-202ENST00000427795 MPPE1Q53F39 396 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 FAM26FQ5R3K3 315 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 FAM173BQ6P4H8 233 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 DHX40Q8IX18 779 aaKnown RBP12.77□□□□□ -0.37
XPC-202ENST00000427795 OR2T34Q8NGX1 318 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 GOLGA1Q92805 767 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 SKA1Q96BD8 255 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 MED8Q96G25 268 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 ZNF578Q96N58 590 aaPredicted RBP12.77□□□□□ -0.37
XPC-202ENST00000427795 ERVMER34-1Q9H9K5 563 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 ADAMTS1Q9UHI8 967 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 SSUH2Q9Y2M2 353 aa12.77□□□□□ -0.37
XPC-202ENST00000427795 COL27A1Q8IZC6 1860 aaPredicted RBP12.76□□□□□ -0.37
XPC-202ENST00000427795 KLK10O43240 276 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 SIGLEC6O43699 453 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 SDC3O75056 442 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 DXOO77932 396 aaKnown RBP12.76□□□□□ -0.37
XPC-202ENST00000427795 ASS1P00966 412 aaKnown RBP12.76□□□□□ -0.37
XPC-202ENST00000427795 CCR5P51681 352 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 GABREP78334 506 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 CEBPZQ03701 1054 aaKnown RBP12.76□□□□□ -0.37
XPC-202ENST00000427795 VAC14Q08AM6 782 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 CST6Q15828 149 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 E2F4Q16254 413 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 SGSM1Q2NKQ1 1148 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 BROXQ5VW32 411 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 CDCP2Q5VXM1 449 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 KIAA1614Q5VZ46 1190 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 BHLHA9Q7RTU4 235 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 C12orf56Q8IXR9 622 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 AHI1Q8N157 1196 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 AADATQ8N5Z0 425 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 KCNE4Q8WWG9 221 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 PLD4Q96BZ4 506 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 SERAC1Q96JX3 654 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 LMLNQ96KR4 655 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 DUSP16Q9BY84 665 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 TRIM4Q9C037 500 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 TNMDQ9H2S6 317 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 CAAP1Q9H8G2 361 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 ASCL3Q9NQ33 180 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 KBTBD4Q9NVX7 518 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 STRIP2Q9ULQ0 834 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 NCKAP1Q9Y2A7 1128 aa12.76□□□□□ -0.37
XPC-202ENST00000427795 A0A1W2PNU3 283 aaPredicted RBP12.75□□□□□ -0.37
XPC-202ENST00000427795 LRRC72A6NJI9 287 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 STX6O43752 255 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 EXOC3O60645 756 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 EIF5BO60841 1220 aaKnown RBP12.75□□□□□ -0.37
XPC-202ENST00000427795 RNASEH2AO75792 299 aaKnown RBP12.75□□□□□ -0.37
XPC-202ENST00000427795 UBE4BO95155 1302 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 KIF20AO95235 890 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 P4HA1P13674 534 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 CSRP3P50461 194 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 AP3M2P53677 418 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 RP1P56715 2156 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 SNRPFP62306 86 aaKnown RBP12.75□□□□□ -0.37
XPC-202ENST00000427795 PPP2CBP62714 309 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 PPP2CAP67775 309 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 ASIC1P78348 528 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 HNRNPA1L2Q32P51 320 aaKnown RBP12.75□□□□□ -0.37
XPC-202ENST00000427795 ZACNQ401N2 412 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 PPP1R26Q5T8A7 1209 aaPredicted RBP12.75□□□□□ -0.37
XPC-202ENST00000427795 RSRC2Q7L4I2 434 aaKnown RBP12.75□□□□□ -0.37
XPC-202ENST00000427795 MMAAQ8IVH4 418 aaKnown RBP12.75□□□□□ -0.37
XPC-202ENST00000427795 SLC25A45Q8N413 288 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 NDRG1Q92597 394 aaKnown RBP12.75□□□□□ -0.37
XPC-202ENST00000427795 TMA16Q96EY4 203 aaKnown RBP12.75□□□□□ -0.37
XPC-202ENST00000427795 MRGPRX3Q96LB0 322 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 NT5C1AQ9BXI3 368 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 APOBEC3GQ9HC16 384 aaKnown RBP12.75□□□□□ -0.37
XPC-202ENST00000427795 SUN2Q9UH99 717 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 STOML2Q9UJZ1 356 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 SCML1Q9UN30 329 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 SMC3Q9UQE7 1217 aa12.75□□□□□ -0.37
XPC-202ENST00000427795 SPENQ96T58 3664 aaKnown RBP12.75□□□□□ -0.37
XPC-202ENST00000427795 ITPR2Q14571 2701 aa12.74□□□□□ -0.37
XPC-202ENST00000427795 LATO43561 262 aa12.74□□□□□ -0.37
XPC-202ENST00000427795 USP12O75317 370 aa12.74□□□□□ -0.37
XPC-202ENST00000427795 ATP5BP06576 529 aaKnown RBP12.74□□□□□ -0.37
XPC-202ENST00000427795 POLR2EP19388 210 aaKnown RBP12.74□□□□□ -0.37
XPC-202ENST00000427795 CASP1P29466 404 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms