RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 UNC5CO95185 931 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 LTFP02788 710 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 TPH1P17752 444 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 PRKCHP24723 683 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 EPHB2P29323 1055 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 FLT3LGP49771 235 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 TMPRSS15P98073 1019 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 PDK1Q15118 436 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 RGS9BPQ6ZS82 235 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 VPS11Q9H270 941 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 ZFYVE28Q9HCC9 887 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 XAB2Q9HCS7 855 aaKnown RBP11.9□□□□□ -0.5
UBR4-207ENST00000425413 SLC38A7Q9NVC3 462 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 ZFP69BQ9UJL9 534 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 FAM237BA0A1B0GVD1 139 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 GOLGA8TH3BQL2 631 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 KRT38O76015 456 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 OR4Q2P0C623 313 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 ALADP13716 330 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 EZRP15311 586 aaKnown RBP11.89□□□□□ -0.51
UBR4-207ENST00000425413 ELNP15502 786 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 TSHRP16473 764 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 SARNPP82979 210 aaKnown RBP11.89□□□□□ -0.51
UBR4-207ENST00000425413 SLC18A2Q05940 514 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 CHI3L2Q15782 390 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 SMYD5Q6GMV2 418 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 TTC7BQ86TV6 843 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 HACE1Q8IYU2 909 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 DNAAF3Q8N9W5 541 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 AZIN2Q96A70 460 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 OXNAD1Q96HP4 312 aaPredicted RBP11.89□□□□□ -0.51
UBR4-207ENST00000425413 ADAM2Q99965 735 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 TRIM55Q9BYV6 548 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 SENP6Q9GZR1 1112 aaPredicted RBP11.89□□□□□ -0.51
UBR4-207ENST00000425413 TKTL2Q9H0I9 626 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 WDR6Q9NNW5 1121 aaKnown RBP11.89□□□□□ -0.51
UBR4-207ENST00000425413 SSU72Q9NP77 194 aaKnown RBP11.89□□□□□ -0.51
UBR4-207ENST00000425413 NOD1Q9Y239 953 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 PCDHA11Q9Y5I1 949 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 CFAP73A6NFT4 308 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 ATP9BO43861 1147 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 ASGR1P07306 291 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 TPSB2P20231 275 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 SERPINB3P29508 390 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 SCNN1AP37088 669 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 MAGEA3P43357 314 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 MAGEA6P43360 314 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 LHX1P48742 406 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 TPSAB1Q15661 275 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 LGSNQ5TDP6 509 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 CES4AQ5XG92 561 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 RGMBQ6NW40 437 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 SAPCD2Q86UD0 394 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 SLC2A13Q96QE2 648 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 FRMD8Q9BZ67 464 aaPredicted RBP11.89□□□□□ -0.51
UBR4-207ENST00000425413 WDCPQ9H6R7 721 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 CYLDQ9NQC7 956 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 TRMT13Q9NUP7 481 aaKnown RBP11.89□□□□□ -0.51
UBR4-207ENST00000425413 ARMCX1Q9P291 453 aa11.89□□□□□ -0.51
UBR4-207ENST00000425413 SDR42E2A6NKP2 422 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 DCTN3O75935 186 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 CACNB2Q08289 660 aaPredicted RBP11.88□□□□□ -0.51
UBR4-207ENST00000425413 PPM1JQ5JR12 505 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 SDHAF4Q5VUM1 108 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 ARCQ7LC44 396 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 KDELC2Q7Z4H8 507 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 LRRTM3Q86VH5 581 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 SOCS4Q8WXH5 440 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 KCTD13Q8WZ19 329 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 NT5C3BQ969T7 300 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 RTP3Q9BQQ7 232 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 COLEC11Q9BWP8 271 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 TMEM120AQ9BXJ8 343 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 PNPLA8Q9NP80 782 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 OR12D3Q9UGF7 316 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 PLLPQ9Y342 182 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 RPS6KL1Q9Y6S9 549 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 NUP205Q92621 2012 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 FAM159BA6NKW6 160 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 TRDMT1O14717 391 aaKnown RBP11.88□□□□□ -0.51
UBR4-207ENST00000425413 PPP1R12AO14974 1030 aaPredicted RBP11.88□□□□□ -0.51
UBR4-207ENST00000425413 ZBTB24O43167 697 aaPredicted RBP11.88□□□□□ -0.51
UBR4-207ENST00000425413 MSI1O43347 362 aaKnown RBP11.88□□□□□ -0.51
UBR4-207ENST00000425413 MOCS2O96007 188 aaPredicted RBP11.88□□□□□ -0.51
UBR4-207ENST00000425413 T-ENOLP0DO92 83 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 MYL2P10916 166 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 PGFP49763 221 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 ARFIP2P53365 341 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 PGGT1BP53609 377 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 PDE1BQ01064 536 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 BST1Q10588 318 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 DPYSQ14117 519 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 CRYMQ14894 314 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 PRKD1Q15139 912 aaPredicted RBP11.88□□□□□ -0.51
UBR4-207ENST00000425413 BZW1Q7L1Q6 419 aaKnown RBP11.88□□□□□ -0.51
UBR4-207ENST00000425413 NUDCD3Q8IVD9 361 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 SPC25Q9HBM1 224 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 TXLNGQ9NUQ3 528 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 DCLK1O15075 740 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 OPHN1O60890 802 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms