RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 VPS36Q86VN1 386 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 PHTF2Q8N3S3 785 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 IL17RCQ8NAC3 791 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 HMGB4Q8WW32 186 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 SYN2Q92777 582 aaPredicted RBP10.02□□□□□ -0.81
HERC3-204ENST00000422770 TPSD1Q9BZJ3 242 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 HAUS4Q9H6D7 363 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 ABCB8Q9NUT2 735 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 SPTLC3Q9NUV7 552 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.02□□□□□ -0.81
HERC3-204ENST00000422770 RRN3Q9NYV6 651 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 ARHGAP20Q9P2F6 1191 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 RAB23Q9ULC3 237 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 CLEC4EQ9ULY5 219 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 PYCARDQ9ULZ3 195 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 MMP17Q9ULZ9 603 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 PAXBP1Q9Y5B6 917 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 PCDHGA2Q9Y5H1 932 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 CEP192Q8TEP8 1941 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 TCRBV21S2A2A0A5A6 115 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 KCNU1A8MYU2 1149 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 PRRT4C9JH25 899 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 H0Y626 953 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 SGK1O00141 431 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 ARHGAP6O43182 974 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 ATMINO43313 823 aaPredicted RBP10.01□□□□□ -0.81
HERC3-204ENST00000422770 AKR1B10O60218 316 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 GFRA3O60609 400 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 ALDH1A2O94788 518 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 IPO7O95373 1038 aaKnown RBP10.01□□□□□ -0.81
HERC3-204ENST00000422770 APBB3O95704 486 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 UNGP13051 313 aaPredicted RBP10.01□□□□□ -0.81
HERC3-204ENST00000422770 HOXB2P14652 356 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 PDGFRAP16234 1089 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 DESP17661 470 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 MMP8P22894 467 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 SDC4P31431 198 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 HNRNPH3P31942 346 aaKnown RBP10.01□□□□□ -0.81
HERC3-204ENST00000422770 SCNN1AP37088 669 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 NBL1P41271 181 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 PRKCIP41743 596 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 SRSF5Q13243 272 aaKnown RBP10.01□□□□□ -0.81
HERC3-204ENST00000422770 GEN1Q17RS7 908 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 FNDC3BQ53EP0 1204 aaKnown RBP10.01□□□□□ -0.81
HERC3-204ENST00000422770 MS4A13Q5J8X5 152 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 RABGAP1LQ5R372 815 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 PIK3R6Q5UE93 754 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 DCUN1D2Q6PH85 259 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 RAD9BQ6WBX8 426 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 CHST9Q7L1S5 443 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 SYT13Q7L8C5 426 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 ZNF571Q7Z3V5 609 aaPredicted RBP10.01□□□□□ -0.81
HERC3-204ENST00000422770 CIR1Q86X95 450 aaPredicted RBP10.01□□□□□ -0.81
HERC3-204ENST00000422770 TMTC1Q8IUR5 882 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 FAM217AQ8IXS0 508 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 ACRBPQ8NEB7 543 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 SLC39A13Q96H72 371 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 PRICKLE1Q96MT3 831 aaPredicted RBP10.01□□□□□ -0.81
HERC3-204ENST00000422770 RPRD1AQ96P16 312 aaPredicted RBP10.01□□□□□ -0.81
HERC3-204ENST00000422770 MCEEQ96PE7 176 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 CHP1Q99653 195 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 FAM126AQ9BYI3 521 aaPredicted RBP10.01□□□□□ -0.81
HERC3-204ENST00000422770 TKTL2Q9H0I9 626 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 WDCPQ9H6R7 721 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 NHEJ1Q9H9Q4 299 aaPredicted RBP10.01□□□□□ -0.81
HERC3-204ENST00000422770 POLMQ9NP87 494 aaPredicted RBP10.01□□□□□ -0.81
HERC3-204ENST00000422770 PIGVQ9NUD9 493 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 CACNA2D2Q9NY47 1150 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 AIPL1Q9NZN9 384 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 GGA2Q9UJY4 613 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 VANGL2Q9ULK5 521 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 INVSQ9Y283 1065 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 RAD54BQ9Y620 910 aa10.01□□□□□ -0.81
HERC3-204ENST00000422770 WDFY4Q6ZS81 3184 aa10□□□□□ -0.81
HERC3-204ENST00000422770 K7ESF4 209 aa10□□□□□ -0.81
HERC3-204ENST00000422770 AXIN1O15169 862 aa10□□□□□ -0.81
HERC3-204ENST00000422770 PAGE1O75459 146 aa10□□□□□ -0.81
HERC3-204ENST00000422770 MOCS3O95396 460 aa10□□□□□ -0.81
HERC3-204ENST00000422770 F9P00740 461 aa10□□□□□ -0.81
HERC3-204ENST00000422770 IGLV3-25P01717 112 aa10□□□□□ -0.81
HERC3-204ENST00000422770 PABPC1P11940 636 aaKnown RBP10□□□□□ -0.81
HERC3-204ENST00000422770 KRT3P12035 628 aa10□□□□□ -0.81
HERC3-204ENST00000422770 POLR2EP19388 210 aaKnown RBP10□□□□□ -0.81
HERC3-204ENST00000422770 GPD1P21695 349 aa10□□□□□ -0.81
HERC3-204ENST00000422770 NTSR1P30989 418 aa10□□□□□ -0.81
HERC3-204ENST00000422770 RDXP35241 583 aaKnown RBP10□□□□□ -0.81
HERC3-204ENST00000422770 KIR2DL1P43626 348 aaPredicted RBP10□□□□□ -0.81
HERC3-204ENST00000422770 ATXN1P54253 815 aaKnown RBP10□□□□□ -0.81
HERC3-204ENST00000422770 C1QBPQ07021 282 aaKnown RBP10□□□□□ -0.81
HERC3-204ENST00000422770 SIM2Q14190 667 aaPredicted RBP10□□□□□ -0.81
HERC3-204ENST00000422770 STARD3Q14849 445 aa10□□□□□ -0.81
HERC3-204ENST00000422770 CRY1Q16526 586 aa10□□□□□ -0.81
HERC3-204ENST00000422770 C15orf59Q2T9L4 293 aaPredicted RBP10□□□□□ -0.81
HERC3-204ENST00000422770 SLC25A52Q3SY17 297 aa10□□□□□ -0.81
HERC3-204ENST00000422770 HSF5Q4G112 596 aaPredicted RBP10□□□□□ -0.81
HERC3-204ENST00000422770 ACAD10Q6JQN1 1059 aa10□□□□□ -0.81
HERC3-204ENST00000422770 SERPINA13PQ6UXR4 307 aa10□□□□□ -0.81
HERC3-204ENST00000422770 MON1BQ7L1V2 547 aa10□□□□□ -0.81
HERC3-204ENST00000422770 IRF2BP2Q7Z5L9 587 aa10□□□□□ -0.81
HERC3-204ENST00000422770 LONP2Q86WA8 852 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms